Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0307 |
Symbol | |
ID | 3916244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 333031 |
End bp | 333927 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640443036 |
Product | LysR family transcriptional regulator |
Protein accession | YP_495589 |
Protein GI | 87198332 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCATCG AGATACGCCA GCTCCGGTAC GCGCTGATGT CAGCAGATCT ACGCAGTTTT TCGGGCGCGG CTTCCAGGCT CAATGTGAAG CAGGCGACGC TCAGTCGCAG TGTCCTGCAA CTCGAGGACA GGCTTGGCAT CAAACTGTTC GAGCGCACCA CCCGCGGCGC GGAACCGACT GAAACCGGAA AGGTCTTTCT CGAGACCGCT CGCCGCATCA TTACCGATCT GGAAAATCTC CAGACCACGG CGCGGGCCGT CAGCTACGGC GAGCAAGGCC GCTTCGCCGT AGGGTATTGC TCCTCGCTCA TGGCCGGGCA CCTAAAGGCC GCCTTCTCCG ACTACCTCAC CCGGTTTCCC GATGTGCAGT TCGACGGAGT CGAAGGCGAT CCGGACAAGC TGTGCAGCGA TCTTCGGGCC GGGACGATCG ATGTTGCGAT CGCGCCGCTC GGCAGCGAAG AACAGGGGAT TGCGTCGCGC CCGGTTTGGT CGGAACGGCT GGTCGCGGCC CTCTACCCCG AGCATCCCTT GCTCGAGGCA AGCCGGATTT ACTGGGGCGA CCTGCGACGC GAGATCTTCG TCGTCCCGCG TAAGGGCATT GGCCAGATGA TCCGTAATAT GATCACCGCG CGCCTCACCG GGCAGGGCTA CCGTCCCAAT ATCATCACCC AGGAAACCAG CCTCGAAAGC GTGCTGAGCA TGGTCCCGGT CGGCCGGTTC ATCACCATTG CCACCGAAGC CTCGATGGGT GTCGCATGGC CGGAGCTGCA GTTCCGGGAC ATCTATGACA ATGGCGGCAC GGCGCGGATC GACTTCGCAC TCTACTGGCG CGAGGACAAC GAGAACCCGG CGCTGCAGCG CTTCTTCACG ATGATCAACG AGCGTTACCC CGCCTGA
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Protein sequence | MTIEIRQLRY ALMSADLRSF SGAASRLNVK QATLSRSVLQ LEDRLGIKLF ERTTRGAEPT ETGKVFLETA RRIITDLENL QTTARAVSYG EQGRFAVGYC SSLMAGHLKA AFSDYLTRFP DVQFDGVEGD PDKLCSDLRA GTIDVAIAPL GSEEQGIASR PVWSERLVAA LYPEHPLLEA SRIYWGDLRR EIFVVPRKGI GQMIRNMITA RLTGQGYRPN IITQETSLES VLSMVPVGRF ITIATEASMG VAWPELQFRD IYDNGGTARI DFALYWREDN ENPALQRFFT MINERYPA
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