Gene Saro_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0303 
Symbol 
ID3916240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp328963 
End bp329664 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content61% 
IMG OID640443032 
Producttwo component transcriptional regulator 
Protein accessionYP_495585 
Protein GI87198328 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGC TGCTGATTGA AGACGAACCG ACCACGGCCA AGGCGATCGA GCTCATGCTC 
ACGACCGAGG GGTTCAACGT CTATTCGACC GATCTCGGGG AAGAAGGCCT CGATCTCGGG
AAGCTGTATG ATTACGACAT CATCCTTCTC GACCTGAACC TGCCGGACAT GCACGGCTAC
GACGTGCTGA AGAAGCTCCG GGTCGCCAAG GTGCAGACGC CGGTGCTGAT CCTGTCGGGC
ATCTCGGAAA TGGACAGCAA GGTCCGCTCG TTCGGCTTCG GCGCGGACGA CTACGTGACC
AAGCCCTTCC ACCGCGAAGA ACTGATCGCC CGCATCCATG CGGTCGTGCG CCGGTCCAAG
GGCCATTCGC AGTCGGTCAT CCGCACCGGC AAGCTCTCGG TCAACCTCGA TGCCAAGACG
GTCGAGGTCG ATGGTGCCCG CGTGCACCTG ACCGGCAAGG AATACGCGAT GCTGGAACTG
CTCTCGCTGC GCAAGGGCAC CACGCTGACC AAGGAAATGT TCCTCAACCA TCTCTATGGC
GGGATGGACG AGCCGGAACT CAAGATCATC GACGTGTTCA TCTGCAAGCT GCGCAAGAAG
CTGGCGCATG CCTGTGGCGG TGAAAACTAC ATCGAAACCG TCTGGGGCCG TGGCTACGTG
CTGCGCGATC CGGACGACAT GAGCGCGATC GAAGCGGCCT GA
 
Protein sequence
MRVLLIEDEP TTAKAIELML TTEGFNVYST DLGEEGLDLG KLYDYDIILL DLNLPDMHGY 
DVLKKLRVAK VQTPVLILSG ISEMDSKVRS FGFGADDYVT KPFHREELIA RIHAVVRRSK
GHSQSVIRTG KLSVNLDAKT VEVDGARVHL TGKEYAMLEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LAHACGGENY IETVWGRGYV LRDPDDMSAI EAA