| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0278 |
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| Symbol | |
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| ID | 3917631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 296295 |
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| End bp | 299132 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640443007 |
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| Product | DNA polymerase I |
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| Protein accession | YP_495560 |
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| Protein GI | 87198303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAAA AGCAGCATCT CTACCTGGTC GACGGTTCGG CCTACATCTT CCGCGCCTAT
CACCGCCTGC CCCCGCTGAC GAACCCGCGC GGCGTGCCTG TCGGCGCGGT CTATGGCTAT
ACGACGATGC TGTGGAAACT GGCCGAGGAC CTGCACAAGG CGGACGGGCC GACGCACCTG
GCGGTCATCC TCGACAAGGC GGGCACCTCG TTCCGCAACG ACCTGTACGA CCAGTACAAG
GCCAATCGTC CGCCGCCGCC CGAAGATCTC GTCCCGCAGT TCCCGCTGAT CCGCGATGCC
ACGCGCGCCT TCAGCCTCGC CTGCATCGAG GAGGACGCGC TCGAGGCGGA CGACCTCATC
GCCTCCTACG CCCGCGCCGC CACGCTGCGC GGCTGGGACG TGACCATCGT TTCATCGGAC
AAGGACCTGA TGCAGCTTGT CGGCAAGTGC GCGACCGGTG GCGGGTGCAT CGACATGCTC
GACACGATGA AGAACCAGCG CATCGACATT CCCGAGGTGG TCGAGAAGTT CGGCGTGCCC
CCGGAAAAGG TCGGCGACGT GCTGGCGCTG ATGGGCGATT CGGTCGACAA CGTGCCCGGC
ATCCGCGGCA TCGGCCCGAA GACCGCGACC AAGCTCATCC AGGAACATGG CGATCTCGAA
TCCGCGCTTG CCGCCGCGCC GACGATGAAG GCGGGCAAGC TGCGCGAAAG CCTGATCGAG
CAGGCGGAAA TGGCCCGCCT CTCGCGCGTG CTGGTGGCGC TCAAGGAAGA CTGCCCGCTG
CCGGTCCCGA TCGAGGACTT CAAGCTCGGC CAGATCCCGC GCGATCCGCT CGCCGCGTTT
CTCGAGGAAC ACGGCTTCAC CAGCCTGCTG CGGCGGCTGG ACGACGGCAA GGGCAGCCCC
GGGCCGAAGA CCCAGCTCAA CCCCGCCAAG CCCGACAACA AGGCTGCGCC CGCCGCGCCC
GAAGGCAACC GCCAGGCGCT ACCCTCGTGG CCCGCGCCCG ACCTCTCGGC CTATGCCTGC
GTCCAGTCGA TGGGCGAACT GCAGCAGTGG ATCGCCCGCG CCTTCGAAGC GCGGGTCGTC
GCCATCGATA CCGAGACCAG CGCGCTCGAC GCGATGCGCG CCGACCTGGT GGGCGTAAGC
CTCGCGCTGG GCCCCAACGA TGCGTGCTAC ATCCCGCTTG GCCACGGCGG CTCCGACATG
TTCGCGGAAA AGCCCCTGCA GGTGGACCGT GCCGAGGCGC TCGCCGCGCT CAAGCCGCTG
CTGGAAAGCG ACGCGGTGCT CAAGGTCGGC CAGAACATCA AGTACGACCT CAACATCCTC
GCCCGGCAGG GGATCATGGT GTCACCCATC GACGACACGA TGGTGATGAG CTTCTGCCTC
GATGCGGGGC GCAGCGAGAC AGGTCTTGCC GGGCACGGGA TGGACGAGCT GTCCGAGCGG
CACCTGCTGC ACACGACGAT GAAGTTCAAG GAGCTGTGCG GCACCGGCAA GAAGGCGATC
TCCTTTGCCG AAGTGCCGCT GGCCGACGCC ACGCGCTATG CCGCCGAGGA CGCGGACGTG
ACGTGGCGCC TGCACCGCCT GTTCCAGCCG CGGCTGGCCG GGGAAGGCGG CACGCGCATC
TACCAGAAGG TCGACCGGCC GCTGATCCCG GTCGTCGCGA TGATGGAACG CAACGGCATC
AAGGTCGACC GCGAGCGACT GTCCGGCCTG TCGACCGAGT TCGCCGCCCA GATCGCGCGC
CTCGAAGGCG TGATCCACGA GAAGTGCGGC ATGTCCTTCA CCATCGGCAG CCCCAAGCAG
CTGGGCGAAG TGCTGTTCGA CAAGCTGGGC TACAAGGGCG GCAAGAAGGG CAAGACCGGG
CAGTATTCGA CCGACCAGTC GGTGCTGGAA GGCCTTGCCG CGCAGGGCGC CGAAGTGGCG
ACACTGGTGC TGGAATGGCG CCAGCTCTCG AAGCTCAAGT CGACCTATAC CGACGCGCTG
CAGGCCGCGA TCAACCCGCA CACCGGCCGC GTCCACACCA GCTACAGCCT GGTGGGCGCG
CAGACCGGCC GCCTGTCTTC AAACGAGCCT AACCTCCAGA ACATCCCGAT CCGCACCGAG
ATAGGCCGCC AGATCCGCGA TGCCTTCGTC GCCGAGCCCG GAAACGTGCT GCTCGCGGCG
GACTACAGCC AGATCGAACT GCGCCTTGCC GCGCACATGG CCGACGTGCC CGCGCTCAAG
GAGGCGTTCG CCGCCGGCGA GGACATTCAC GCGCGTACTG CGATGGAAAT GTTCGGCACG
GTCGACCGCG ATACGCGCGG ACGGGCCAAG ACGATCAACT TCGCTATCCT CTACGGCATC
AGCCGGTGGG GCCTCGGCGG ACGGCTGGGC GTCAGCGCGG ACGAGGCGCA GGCGATGATC
GACCGCTACT TCGAACGCTT CCCCGGCATC CAGCGCTACA TCCACGAGAC ATTGGAGAGT
GTGCGCGAGC GCGGCTATTC CGAGACGCTG TTCGGCCGCA AGACCTGGTT CCCGCGCATA
AGCTCGAAGA ACCAGGCCGA ACGCCAGGGC AGCGAGCGCG CTGCGATCAA CGCGCCGATC
CAGGGCACCA GCGCCGACAT CATCAAGCGC GCGATGGCCC GCATGATGCC CGCGCTGACC
GAAGCGGGCC TCGGCCACGT GCGCATGCTG CTGCAGGTCC ACGACGAACT CGTGTTCGAA
CTGCCCCAGG GCGACGTCGA GGCGGCGAAG CCCGTGATCG AGCGCGTGAT GGCGACGGCG
GCAGAACCTG CGGTCAAGCT CAGCGTGCCG CTGGGCGTCG AGATCGGCAC CGGCCTGTCG
TGGGGCGCGG CGCACTGA
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| Protein sequence | MDEKQHLYLV DGSAYIFRAY HRLPPLTNPR GVPVGAVYGY TTMLWKLAED LHKADGPTHL
AVILDKAGTS FRNDLYDQYK ANRPPPPEDL VPQFPLIRDA TRAFSLACIE EDALEADDLI
ASYARAATLR GWDVTIVSSD KDLMQLVGKC ATGGGCIDML DTMKNQRIDI PEVVEKFGVP
PEKVGDVLAL MGDSVDNVPG IRGIGPKTAT KLIQEHGDLE SALAAAPTMK AGKLRESLIE
QAEMARLSRV LVALKEDCPL PVPIEDFKLG QIPRDPLAAF LEEHGFTSLL RRLDDGKGSP
GPKTQLNPAK PDNKAAPAAP EGNRQALPSW PAPDLSAYAC VQSMGELQQW IARAFEARVV
AIDTETSALD AMRADLVGVS LALGPNDACY IPLGHGGSDM FAEKPLQVDR AEALAALKPL
LESDAVLKVG QNIKYDLNIL ARQGIMVSPI DDTMVMSFCL DAGRSETGLA GHGMDELSER
HLLHTTMKFK ELCGTGKKAI SFAEVPLADA TRYAAEDADV TWRLHRLFQP RLAGEGGTRI
YQKVDRPLIP VVAMMERNGI KVDRERLSGL STEFAAQIAR LEGVIHEKCG MSFTIGSPKQ
LGEVLFDKLG YKGGKKGKTG QYSTDQSVLE GLAAQGAEVA TLVLEWRQLS KLKSTYTDAL
QAAINPHTGR VHTSYSLVGA QTGRLSSNEP NLQNIPIRTE IGRQIRDAFV AEPGNVLLAA
DYSQIELRLA AHMADVPALK EAFAAGEDIH ARTAMEMFGT VDRDTRGRAK TINFAILYGI
SRWGLGGRLG VSADEAQAMI DRYFERFPGI QRYIHETLES VRERGYSETL FGRKTWFPRI
SSKNQAERQG SERAAINAPI QGTSADIIKR AMARMMPALT EAGLGHVRML LQVHDELVFE
LPQGDVEAAK PVIERVMATA AEPAVKLSVP LGVEIGTGLS WGAAH
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