Gene Saro_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0169 
Symbol 
ID3918133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp170278 
End bp171132 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID640442895 
Productpeptidase M23B 
Protein accessionYP_495452 
Protein GI87198195 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGCC GCCGCGACTT TCTTTCCAGT GGCATCGCTG CGACCACGGT GCTGTTGCTG 
GGCAACACGC CCTTGCCGCC GATCATTATA GACGAAGGCG GTCAACCGAC GCAGGGCGGC
TGGCTGCGTG GCCGCACAAG CGGGGTCACC GGCCTCGCGC TCGACGGCAA GGGCGTTGCG
ATGGGGGCCG ACGGTGCTTT CCTCATCGCT TTCGATCGAG ACGCCCCTCC GCTCGCACGC
CTCGTTGCCA CGGTTGCCGG CGGCCAGGCC GTCGCGCGCG ACATCGTCGT CGCGACCCGC
GCATGGCAGA TCGAACACGT CAATGTCGCA AAACGGCCCG GCGCCGTTCC GGACGAGGAA
TTCCTGCGCA TTCGCAAGGG TGAACTTGCC CGCATCGCGG CGGCGCGCGC CCGCCGGACC
GGCGCCGAGG GCTGGCGACA GGATTTCGTG CGTCCGGCCC CCGGCCGTTT CTCGGGCCGC
TTCGGTGCGC AGCGCATCTA CCGCGGGGAG CCCGGATCGT ACCACTCCGG CCTGGACATA
GCCGGCGGCG CAGGCACGGC CTTCATCGCG CCGGCCGATG GCGTGGTGAC GCTAGCCGCC
GCCGACAGCC CGTTCTCGCT CGAAGGGCAC TTGCTGATGC TCGACCACGG AAACGGCCTC
AACAGCGCCT TCCTGCATTG CTCGGCCCTG TCCGTCGTCG AGGGAGAGAC GGTCCGGCAG
GGACAAGTGA TCGGCCGCAT CGGTAGCAGC GGACGTGCGA CCGGGCCTCA TCTTCACTGG
TCGATAAGGT GGGAAGAGAG CCGGCTCGAC CCCCTGCTCT TTCTCCCACA ATTGGTATCA
GCCGCAACCC TTTGA
 
Protein sequence
MIRRRDFLSS GIAATTVLLL GNTPLPPIII DEGGQPTQGG WLRGRTSGVT GLALDGKGVA 
MGADGAFLIA FDRDAPPLAR LVATVAGGQA VARDIVVATR AWQIEHVNVA KRPGAVPDEE
FLRIRKGELA RIAAARARRT GAEGWRQDFV RPAPGRFSGR FGAQRIYRGE PGSYHSGLDI
AGGAGTAFIA PADGVVTLAA ADSPFSLEGH LLMLDHGNGL NSAFLHCSAL SVVEGETVRQ
GQVIGRIGSS GRATGPHLHW SIRWEESRLD PLLFLPQLVS AATL