Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0145 |
Symbol | |
ID | 3918119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 146720 |
End bp | 147157 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640442870 |
Product | cytidine deaminase |
Protein accession | YP_495428 |
Protein GI | 87198171 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTATCG ATCTTGTCGC GGAACGCCGG GAAGCGCTGG TCGCCGCTGC ACGCACGGCG ATGGGCACTG CCTATGCGCC CTATTCCGGT TTCCATGTGG GCGCGGCGCT GCTGTTCGAG GACGGCGCGA TCGTTACGGG AGCGAACGTC GAGAACGCCA GCTACGGCCT CTCGCTTTGC GCCGAGACGG TCGCCTGTTC AATCGCGGCC CACGCGGGGC GCCGCGGCGG ACTTCTGGCG GTGGCGGTGT CCGGAGGCGC TGGCGGGCGG GCGGATGCGG CAATCAGCCC TTGCGGACGC TGCCGGCAGG TGTTGAACGA ACTGGCCGCG CTTGGCGGGA CTGACCCGCT GGTGATCTGC ACCAGCGCCA AGGAAACCGT GGAAATGCGG CTGTCTGCGC TCTTGCCCAA TGCCTTCGGT CCGGCCAATC TGGCGTGA
|
Protein sequence | MSIDLVAERR EALVAAARTA MGTAYAPYSG FHVGAALLFE DGAIVTGANV ENASYGLSLC AETVACSIAA HAGRRGGLLA VAVSGGAGGR ADAAISPCGR CRQVLNELAA LGGTDPLVIC TSAKETVEMR LSALLPNAFG PANLA
|
| |