Gene Saro_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0145 
Symbol 
ID3918119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp146720 
End bp147157 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID640442870 
Productcytidine deaminase 
Protein accessionYP_495428 
Protein GI87198171 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG ATCTTGTCGC GGAACGCCGG GAAGCGCTGG TCGCCGCTGC ACGCACGGCG 
ATGGGCACTG CCTATGCGCC CTATTCCGGT TTCCATGTGG GCGCGGCGCT GCTGTTCGAG
GACGGCGCGA TCGTTACGGG AGCGAACGTC GAGAACGCCA GCTACGGCCT CTCGCTTTGC
GCCGAGACGG TCGCCTGTTC AATCGCGGCC CACGCGGGGC GCCGCGGCGG ACTTCTGGCG
GTGGCGGTGT CCGGAGGCGC TGGCGGGCGG GCGGATGCGG CAATCAGCCC TTGCGGACGC
TGCCGGCAGG TGTTGAACGA ACTGGCCGCG CTTGGCGGGA CTGACCCGCT GGTGATCTGC
ACCAGCGCCA AGGAAACCGT GGAAATGCGG CTGTCTGCGC TCTTGCCCAA TGCCTTCGGT
CCGGCCAATC TGGCGTGA
 
Protein sequence
MSIDLVAERR EALVAAARTA MGTAYAPYSG FHVGAALLFE DGAIVTGANV ENASYGLSLC 
AETVACSIAA HAGRRGGLLA VAVSGGAGGR ADAAISPCGR CRQVLNELAA LGGTDPLVIC
TSAKETVEMR LSALLPNAFG PANLA