| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0040 |
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| Symbol | |
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| ID | 3916043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 44243 |
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| End bp | 45412 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640442765 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_495323 |
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| Protein GI | 87198066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACG AAACGACCAT CGATGCCGAG GGCGCACAGG CGCTGGGATC CCTGGCCGAC
GGGGAGGACA GCGCAAGCCA ATCGCGGCGC AAGTGGATCA TCGGCGTCGC CGTGGTGCTG
CTGGTCGTGC TTGCCTGGTG GTTCCTGCAT GGACCGAGCG AGCCGGCCGG TCCGGCGAAG
ACCCAGGCCC AGGTGGTCAC GGTCGTCGTG CCGGGCAAGA CCGTCATTGC CGGTACCATA
ACCGCCAGCG GCACGATCGC CGCGCGCCGC GAGATGCCCG TTGGCGTCGC GGGCGAGGGC
GGACAGATCG TGCAGGTCCT TGTCGACGCG GGCGACTGGG TTCGTGCAGG GCAGGTGCTG
GCCGTCATCG ACCGTTCGGT GCAGGGCCAG CAGATCGCCA GCCAGGCCGC CAACGTCGAA
GTTGCGGCGG CTGACGCGCG GCTGGCGCAA GCCAATCTCG ACCGTGCACT CAAGCTGGTC
GAGCGCGGTT TCATTTCCAA GGCCGACGTC GACCGCCTGA CCGCCACCCG CGACGCGGCC
GTGGCGCGCG TTCGCGTGGC CCGGGCAAGC CTGGGAGAAC TGGGCGCGCG TGCGGCGCGG
CTCAACATCG TGGCGCCGGC GGCGGGGCTT GTCCTCACCC GCGCGGCCGA ACCGGGCCAG
ATCGTCAGCT CGGGTTCGGG CGTGCTGTTC TCGCTTGCCC GCGACGGGCA GATGGAAATG
CAGGCGCGCC TTGCCGAAGC CGACCTTGCG CGGTTGACAG TGGGCGCCAC CGCCGAGGTG
ACGCCCGTGG GCACGACCCG CGTCTTCAAC GGGCAGGTCT GGCAGCTTTC GCCGACCATC
GACCAGCAAT CGCGCGAGGG CATCGCCCGC ATCGCGTTGT CCTATGATCC TGCGCTGCGT
CCGGGCGGTT TCGCCAGCGC GACGCTGCGT TCGGGCACGG TCACCGCGCC GCTCCTGCCG
GAATCGGCCA TTCTGAGCGA CGACAAGGGC ACCTTCGTCT ACGTCGTGGG CAGCGACAAC
AAGGCCCAGC GGCGCGACGT GAAGACCGGC GAGGTCGGCG CGCGCGGCAT TTCGGTGGTC
CAGGGTCTGG CGGGCAACGA GCGGGTGGTG CTGCGGGCGG GCGGATTCCT GAATCCGGGC
GACGCGGTCC AGCCAGTCCT CGCCAAGTAG
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| Protein sequence | MNYETTIDAE GAQALGSLAD GEDSASQSRR KWIIGVAVVL LVVLAWWFLH GPSEPAGPAK
TQAQVVTVVV PGKTVIAGTI TASGTIAARR EMPVGVAGEG GQIVQVLVDA GDWVRAGQVL
AVIDRSVQGQ QIASQAANVE VAAADARLAQ ANLDRALKLV ERGFISKADV DRLTATRDAA
VARVRVARAS LGELGARAAR LNIVAPAAGL VLTRAAEPGQ IVSSGSGVLF SLARDGQMEM
QARLAEADLA RLTVGATAEV TPVGTTRVFN GQVWQLSPTI DQQSREGIAR IALSYDPALR
PGGFASATLR SGTVTAPLLP ESAILSDDKG TFVYVVGSDN KAQRRDVKTG EVGARGISVV
QGLAGNERVV LRAGGFLNPG DAVQPVLAK
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