Gene Sare_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_5040 
Symbol 
ID5707311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5707579 
End bp5708037 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content70% 
IMG OID641274433 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001539774 
Protein GI159040521 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0166005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGATCG ACGCAGTGGA TCAGCGAATC ATTGCACTGC TTGTTTCTGA TGCCCGCGCG 
TCGTACGCCG ACATCGGACA ACGCGTGTCC CTGTCCGCAC CGGCGGTCAA ACGCCGAGTC
GACCGGCTAC GCGCGACCGG GGTCATCCGG GGATTCACCG CTGTCGTCGA TCCGGCTGCG
GTCGGATGGA CCACCGAGGC GTTCGTCGAG CTGTTCTGCG CCGGTCGGAC CACGCCACCG
CAGATCGGTG TCGCCGCCCG CCGGCACCCT GAGGTCGTCG GTGCCTACAC CGTGTCCGGC
GAGGCGGACG CCCTCGTCCA CCTGCGCGCC GCCGACATCG CCCACCTCGA GGCCGCGCTG
GAACGGCTGC GGGCCGAGCC CTTCGTGACC TCCACCCGCA GCACCATCGT GCTCTCCCGG
CTCGTCGAGT CGCCCGGCGT CGGCCCGTCG GCCGACTGA
 
Protein sequence
MQIDAVDQRI IALLVSDARA SYADIGQRVS LSAPAVKRRV DRLRATGVIR GFTAVVDPAA 
VGWTTEAFVE LFCAGRTTPP QIGVAARRHP EVVGAYTVSG EADALVHLRA ADIAHLEAAL
ERLRAEPFVT STRSTIVLSR LVESPGVGPS AD