| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4986 |
|---|
| Symbol | |
|---|
| ID | 5706135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 5655528 |
|---|
| End bp | 5656418 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641274379 |
|---|
| Product | transketolase central region |
|---|
| Protein accession | YP_001539720 |
|---|
| Protein GI | 159040467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3958] Transketolase, C-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.545662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000179953 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGACA CCTTCATCGA CACCACCACC GCGCTGCTGG CCGACGAGCC GCGTACCGCG
CTGGTGTTGG CCGATATCTC CGCCGCCCTC TTCGCGCCGG CCGCGGCCCG GCACCCGGAC
CGGGTCCTGA ACGTGGGGAT CCGGGAGCAA CTGATGGTCG GGGTGGCCGG TGGACTGGCG
TTGACCGGCC TGCGGCCGAT CGTGCACTCC TACGCGCCGT TCCTGGTCGA GCGGGCCTAC
GAGCAGCTCA AGCTCGACCT GGACCATCAG GACGCGAGCG CGGTGCTGGT CAGTGTGGGC
GCCTCGTACG ACCGTGCGGC GGCCGGACGG ACCCACCTGT CGCCGGCAGA CGTCTCGCTG
ATCGACACCC TGGACGGCTG GACGGTGCAG GTGCCCGGCC ACCCCGGCGA GGTGCCACCG
CTGCTGCGGG CGGCGGTGGC CGCGGACACG TCGGCGTACC TACGGCTGTC CGTGCTGCGC
AACGACCGGC CGCTGGGTGG GGACGGCGCC CTTCGGGTGG TGCGGGACGC CGGACCGGGA
GCACCACTGG TGGTGGCCGT CGGGCCGACT CTGGACGCGG CTCGGGCGGC GCTGGCCGAC
CTGCCCGTCA CGGTGGCGTA CACCAACCGG CCGCGGCCGT TCGATGTCGC CGGGCTGCGG
GATCGGGCCA GCACGGACGT GATCCTGGTC GAGCCCTACC TCGCCGGGAC GTCCAGCCGG
GTGGTCTCGG CGGCGCTGGC GGACCGCCCG CACCGGCTGC TCGCGCTCGG CGTCGGGCAT
TCGGAGCTGC GGCGGTACGG GTCGGCCGAC GACCACACCC GCTGGCATGG CCTGGACGCA
CCAGGGCTGC GGCGATCAAT CGTGGACTTT GCTTTCTCGG CGCCACGCTG A
|
|---|
| Protein sequence | MRDTFIDTTT ALLADEPRTA LVLADISAAL FAPAAARHPD RVLNVGIREQ LMVGVAGGLA
LTGLRPIVHS YAPFLVERAY EQLKLDLDHQ DASAVLVSVG ASYDRAAAGR THLSPADVSL
IDTLDGWTVQ VPGHPGEVPP LLRAAVAADT SAYLRLSVLR NDRPLGGDGA LRVVRDAGPG
APLVVAVGPT LDAARAALAD LPVTVAYTNR PRPFDVAGLR DRASTDVILV EPYLAGTSSR
VVSAALADRP HRLLALGVGH SELRRYGSAD DHTRWHGLDA PGLRRSIVDF AFSAPR
|
|---|
| |