| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4707 |
|---|
| Symbol | |
|---|
| ID | 5707216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5329146 |
|---|
| End bp | 5329658 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641274105 |
|---|
| Product | amino acid-binding ACT domain-containing protein |
|---|
| Protein accession | YP_001539451 |
|---|
| Protein GI | 159040198 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2716] Glycine cleavage system regulatory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.4333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.012003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC TCGCCATCAC CGTCATCGGC CGAGACCGGC CGGGCATCGT AGCCGACGTC
GCCGAGGTAC TCGCCCGCCT CGGCGCGAAC CTCACCGACA GCACCATGAC CCGGTTGCGG
GGGCATTTCG CGATGACCCT GATCTGTGTG GGCCCGGCCG TCGCCGAGGT CGAGGCGGCG
CTGGCACCGC TGGCCGCCGA CGGTCAGCTA CTGGCGACGG TACGCGCGGT GGTGCCGGAC
GGAGAGCGGG CGTCGAGCGG TGAGCCGTAC GTGCTGGCGG TGCACGGCGC CGACCGGATG
GGCATCGTGG CCGCCATGAC CCGGGCGCTT GCGGATGCGG GCGGCAACGT CACGGATCTG
AGTACCCGGC TCGCTGGCGC ACTCTATGTC GTCGTCGCCG AGGTGGAGCT GCCACCGGGG
GTGGCCGAGA AGGTGGCGGC CCGGTTGTCG TCGACCGCCG CCGAACTCGG TGTGGATGTC
ACTCTTCGGC CGGCAGACCC GGACGTGCTG TGA
|
|---|
| Protein sequence | MSELAITVIG RDRPGIVADV AEVLARLGAN LTDSTMTRLR GHFAMTLICV GPAVAEVEAA
LAPLAADGQL LATVRAVVPD GERASSGEPY VLAVHGADRM GIVAAMTRAL ADAGGNVTDL
STRLAGALYV VVAEVELPPG VAEKVAARLS STAAELGVDV TLRPADPDVL
|
|---|
| |