Gene Sare_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4689 
Symbol 
ID5708149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5311585 
End bp5312610 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content73% 
IMG OID641274087 
ProductTPR repeat-containing protein 
Protein accessionYP_001539433 
Protein GI159040180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.597209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG ACCCCACCTC CGACCGGTCC GCCGCCGACG GGTACCTCCA GCGAGCCCAG 
CTCCTCGCCG AACTCGGCCG GTACGACGAG GCCGCCACCG AGTTGGGGTA CGCCGTCGCC
CTCGATCCCA CCAACGCGAC GGTGCTGACC ACGCTGTCCC GGGTGCATCT CGCGGCCGGT
CGGCCCGCCG ACGCGCGCAC CGCCGCCGAC GGCGCGTTGG CCGCCGCTCC CGACTGGGTT
CCCGCCCTCG TCGCTCGGGC GATGGCCCTG GCCGACCTGA CCGAACACGG GGAGGCGGCC
CGGACCGCGG ATCGGATTCT CGCCCTGGGG CCGGACGACG CGTACGCCCA GCGTAGCGGT
GCGGCGATCC TGGCCGGTTC CCGGAACGGC CAGCCGGCGC TGAACGCCGC GTGGCGCGGA
GTGGAGCTGG CTCCGCAGGA CCCGGCGGCG CACCTGGTGC TGGGGCTGGT CGCGGCGAAC
CTCCAGCTTT ACGACCTGGC CGAGCGGGCG TACACCGAAG CGTTGCGGCT CGATCCGCAG
CTCGCCGAGG CGCGGCACGA CATCGGGGTA CTGCGGCTGG AGCAACGCCG GTGGAGCGAG
GCGCTGGAGC ACCTCGCCGA CGCGGCGGCG ATCAGCCCTG GCCGGATCAA TTCGGTGCGA
ACGATCTCGG CTGGCCTTCG CCAGCTCGTC GTGTTTGGTG CCGGTTGGTC GATGGTCGCC
GCGGTGGTGA TCGCCTGCTT CGCGGTGGGC AGCGAGGGGC TGTCTCGGGC TGTGGCGCTG
GTGGCCGCCC TGGGCGGCGC GCTGGTGGTG TGGCGGTACA CGGCGCGGCT GCCGGGTGTT
GCCCGCACGA TCCTGCCGGA GCTGTTGCGG TCCGACCGGG CTCTGGCGTT GGCCGGGTAC
GCCACTGGTG CCGCTCCGGT GTTGCTGTTG GTCTACGCCT TGGTCGGCAC TGTGTGGCCG
CTGGTTCTGG CGATCGCGGT GGCAGCCTTC GCCGTCGTTA CCGCGCTCGC CCGCCGGGTG
CGCTGA
 
Protein sequence
MPSDPTSDRS AADGYLQRAQ LLAELGRYDE AATELGYAVA LDPTNATVLT TLSRVHLAAG 
RPADARTAAD GALAAAPDWV PALVARAMAL ADLTEHGEAA RTADRILALG PDDAYAQRSG
AAILAGSRNG QPALNAAWRG VELAPQDPAA HLVLGLVAAN LQLYDLAERA YTEALRLDPQ
LAEARHDIGV LRLEQRRWSE ALEHLADAAA ISPGRINSVR TISAGLRQLV VFGAGWSMVA
AVVIACFAVG SEGLSRAVAL VAALGGALVV WRYTARLPGV ARTILPELLR SDRALALAGY
ATGAAPVLLL VYALVGTVWP LVLAIAVAAF AVVTALARRV R