Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4689 |
Symbol | |
ID | 5708149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5311585 |
End bp | 5312610 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641274087 |
Product | TPR repeat-containing protein |
Protein accession | YP_001539433 |
Protein GI | 159040180 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.597209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCG ACCCCACCTC CGACCGGTCC GCCGCCGACG GGTACCTCCA GCGAGCCCAG CTCCTCGCCG AACTCGGCCG GTACGACGAG GCCGCCACCG AGTTGGGGTA CGCCGTCGCC CTCGATCCCA CCAACGCGAC GGTGCTGACC ACGCTGTCCC GGGTGCATCT CGCGGCCGGT CGGCCCGCCG ACGCGCGCAC CGCCGCCGAC GGCGCGTTGG CCGCCGCTCC CGACTGGGTT CCCGCCCTCG TCGCTCGGGC GATGGCCCTG GCCGACCTGA CCGAACACGG GGAGGCGGCC CGGACCGCGG ATCGGATTCT CGCCCTGGGG CCGGACGACG CGTACGCCCA GCGTAGCGGT GCGGCGATCC TGGCCGGTTC CCGGAACGGC CAGCCGGCGC TGAACGCCGC GTGGCGCGGA GTGGAGCTGG CTCCGCAGGA CCCGGCGGCG CACCTGGTGC TGGGGCTGGT CGCGGCGAAC CTCCAGCTTT ACGACCTGGC CGAGCGGGCG TACACCGAAG CGTTGCGGCT CGATCCGCAG CTCGCCGAGG CGCGGCACGA CATCGGGGTA CTGCGGCTGG AGCAACGCCG GTGGAGCGAG GCGCTGGAGC ACCTCGCCGA CGCGGCGGCG ATCAGCCCTG GCCGGATCAA TTCGGTGCGA ACGATCTCGG CTGGCCTTCG CCAGCTCGTC GTGTTTGGTG CCGGTTGGTC GATGGTCGCC GCGGTGGTGA TCGCCTGCTT CGCGGTGGGC AGCGAGGGGC TGTCTCGGGC TGTGGCGCTG GTGGCCGCCC TGGGCGGCGC GCTGGTGGTG TGGCGGTACA CGGCGCGGCT GCCGGGTGTT GCCCGCACGA TCCTGCCGGA GCTGTTGCGG TCCGACCGGG CTCTGGCGTT GGCCGGGTAC GCCACTGGTG CCGCTCCGGT GTTGCTGTTG GTCTACGCCT TGGTCGGCAC TGTGTGGCCG CTGGTTCTGG CGATCGCGGT GGCAGCCTTC GCCGTCGTTA CCGCGCTCGC CCGCCGGGTG CGCTGA
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Protein sequence | MPSDPTSDRS AADGYLQRAQ LLAELGRYDE AATELGYAVA LDPTNATVLT TLSRVHLAAG RPADARTAAD GALAAAPDWV PALVARAMAL ADLTEHGEAA RTADRILALG PDDAYAQRSG AAILAGSRNG QPALNAAWRG VELAPQDPAA HLVLGLVAAN LQLYDLAERA YTEALRLDPQ LAEARHDIGV LRLEQRRWSE ALEHLADAAA ISPGRINSVR TISAGLRQLV VFGAGWSMVA AVVIACFAVG SEGLSRAVAL VAALGGALVV WRYTARLPGV ARTILPELLR SDRALALAGY ATGAAPVLLL VYALVGTVWP LVLAIAVAAF AVVTALARRV R
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