Gene Sare_4683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4683 
Symbol 
ID5704310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5305731 
End bp5306987 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content74% 
IMG OID641274081 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001539427 
Protein GI159040174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.239765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.305747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTCC CGACGGGTCG CCGGCTGTTC GTACTGGCGG CGGCGGTCGT GGTGTTGGTG 
GTGGTGACTG CGGCCACGGT TTACCGGGTG CTCGCCCCGG CCGAGGTCAG CACGCCGGCG
GCCGGGACCT ACCCCACCGC TCCGGCCTGG GACCCAGCCC CGGGTGTCAT CGCCCGGCTG
CCGGCGGCCC CGCTGGTGGT GGACGGTCGG ATCCGGGTGT ACGCGGCCCA GCGCCAGGTC
TACGCCGACC TGCCGGTGAC ACACCAACAC CGGAGCACCC CGTACTGGTC CTACCGCCGC
TGGCCTGCCG AGCTGGTCGG CGTCGTGGCC AGCGGTCACA CCGTCGTGAC CCGCTGGTCC
GACGGCCGGA TAGTGACGCT GGACGGGCGT ACCGGGCGGG TGACCTGGCA AGCTGAGGGG
CCGGTGCCGG AGCGTGATGC GGCGGCCCGG TATACCGGTG CGACATCCGT GTGGAACCCG
GACGGGCTCT TCGTCAGCCC AGCCGAGGGC ACGGAGGTGG TGTTGTCCGC CGGCAGCGGT
GCCCTGGCCG GATGGGACCT GGCCGACGGG CAGCGACTCT GGCGCTCCGA GGTCGGGGAG
GGCTGTCACC GGGCGGTCGG CACCACGACG GCGGGCGGGC TGGTGAGCCT CGACTCGTGC
GGTGCCGAGG CGACCGTTGA CGTTCGGGAC GCGGCGACCG GCAGGGTTGA CCGCTGGCGT
CCGCCCGGCG CGAGCACGAC GCTGGCCGCC ACCCCGCTCG GTTGTCACGC CGGCCGATCC
GGTTGCGCCG GCCTGCGCAC GGCCGCCGGC CCGGGCGACG ACGCGGCCCG GGGCTGGCTG
TTCGGCGACG GGGAGCCGGT GGCGGCACCG GTGCTGGACC GGACCGACAC CGTGCTCGCC
GGTGGTATCG CGGTCGGGAC ACTCGATGGC GTGCTGGTGG GCCGCGACGC CCGGACGGGG
GCCGAGCGGT GGCGCCGCGA GGATGTGGAC GGTGCCCGGG TGCTCGCGGC GGAACCGGAC
CGCGTGCACC TGGTGACCGA CAGGAACGAC CTGGTGACGC TCGATTCGGC CAACGGGGAT
CAACGATCCC GATTCGTGCT CACCCTCGGT ACCGACGGGA CGTCGTGGGC CCCGGGCGCG
ACGTACGCGG TCGACGGTTA CCTGGCGGTC GAGCGGCTCC GCGTCCCGGT CGCCTCGGAA
GCGGACGACC AGCGCTACTT CTTCACCTCG CGGCCGGTCC TGCTCGCCGC GACCTGA
 
Protein sequence
MGFPTGRRLF VLAAAVVVLV VVTAATVYRV LAPAEVSTPA AGTYPTAPAW DPAPGVIARL 
PAAPLVVDGR IRVYAAQRQV YADLPVTHQH RSTPYWSYRR WPAELVGVVA SGHTVVTRWS
DGRIVTLDGR TGRVTWQAEG PVPERDAAAR YTGATSVWNP DGLFVSPAEG TEVVLSAGSG
ALAGWDLADG QRLWRSEVGE GCHRAVGTTT AGGLVSLDSC GAEATVDVRD AATGRVDRWR
PPGASTTLAA TPLGCHAGRS GCAGLRTAAG PGDDAARGWL FGDGEPVAAP VLDRTDTVLA
GGIAVGTLDG VLVGRDARTG AERWRREDVD GARVLAAEPD RVHLVTDRND LVTLDSANGD
QRSRFVLTLG TDGTSWAPGA TYAVDGYLAV ERLRVPVASE ADDQRYFFTS RPVLLAAT