Gene Sare_4649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4649 
Symbol 
ID5705705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5267756 
End bp5268742 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID641274049 
ProductCaCA family Na(+)/Ca(+) antiporter 
Protein accessionYP_001539396 
Protein GI159040143 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.168713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GGATTCTCCT CGCCGTCGCC GGTCTACTGC TGCTCACCCT GGCTGCCGAC 
CATCTCGTGC TCGGCGCGTC CCAGCTTGCC CACCGGCTAC GGATCAGACC GGTCGTCGTC
GGCGTCGTGG TGATCGGCCT CGGCACCTCG GCGCCTGAGC TGCTGGTCTC CGGGGTGGCT
GCGGCTCGAG GAGACACGAG CATCGCCCTG GGTAACATCA CGGGCTCCAA CATCCTCAAC
CTGACCATGG TCCTCGGCGT CGCGGCACTT GTCGCAAAAG TCACCGTGAG GTCGACCGTG
GTCTACCGCG AGGCCCGGCT CGCGGTCTCC GCGGTGGTCC TCTTCGGCCT CCTGGCCTGG
ACCGGCCTCA CGGTCGTCAC CGGCGCGGTG CTGCTGCTCG CCGCCGCCGG TGCGCTGTGG
CTACTGGTGC GATGGGCGGG CGGAGGGCAA GCCCACACCC TGCTCGGGGA CGTGGTCGAC
CACGTGGACG GCGACGCCAT CACCAGGGAC GACCCGGGCG GGCAAACCGA TCCGGCACAG
CGGCAGCTGC CGGCCTGGTC AGAACCGGTC CGCACCGTAC TCGGCCTCGC CGGGGTCCTG
GCTGGGGCGC AGTTGCTGGT CGTCAACGCC GCCGCCATCG CGACCGATCT GGGCGTCCCA
CAACTGGTCA TCGGGATCAC CCTGGTCGCG GTGGGCACCT CGCTGCCGGA GTTGGTGACC
ACGATCCAAG CCCAGCGGCA CGGTGAGTCG GACCTGCTCG TGGGTAATCT GTTCGGATCC
AACCTGTTCA ACAGCCTCGT TGGCGGCGCT GTGATCGCCT TCGCCGCGCC GACCAGCGTT
CCCGGTACCA ACATCGCGCT CGTGGTGGTG ATGAGTCTGA CCGCGCTGAC GGCGTGGGCG
CTGCTACGCC GGAGCTTCTC ACTCACCCGC CGGGAAGGCT CCGTGCTGCT CGCGGCGTAT
GTGCTGACGA TGCCGTTGCT GCTGTGA
 
Protein sequence
MTIRILLAVA GLLLLTLAAD HLVLGASQLA HRLRIRPVVV GVVVIGLGTS APELLVSGVA 
AARGDTSIAL GNITGSNILN LTMVLGVAAL VAKVTVRSTV VYREARLAVS AVVLFGLLAW
TGLTVVTGAV LLLAAAGALW LLVRWAGGGQ AHTLLGDVVD HVDGDAITRD DPGGQTDPAQ
RQLPAWSEPV RTVLGLAGVL AGAQLLVVNA AAIATDLGVP QLVIGITLVA VGTSLPELVT
TIQAQRHGES DLLVGNLFGS NLFNSLVGGA VIAFAAPTSV PGTNIALVVV MSLTALTAWA
LLRRSFSLTR REGSVLLAAY VLTMPLLL