| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4540 |
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| Symbol | |
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| ID | 5705981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5132856 |
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| End bp | 5134376 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641273954 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001539303 |
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| Protein GI | 159040050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.129106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00302013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACCT CACCGCTCGA TCGGGCTGCC GATTCCTTCG CCGTCGAACT CGCCCGCCAC
CGGACCGGGC GAGGGCTGTC CAAGAAACAG CTGGCGACCC TGATGGGATT CGACCCCTCG
TACGTCAGCC ACGTCGAGGG ACGTCGGCAC CGTCCCACCG AGGACTTCGC CCGGCGGGCG
GAGGCCGTAC TGGAAGCCAG CGGGGCGATC TGGCAGCGCT TCCGCGACTA CGACGAACTC
CGCCACACCC GCGGCGACCG GGCGCCGCAC CGCGAGCCAC CCGCCCCCGG GCAGTGGCTG
CCCCCCGGTA CCGGCCTGAT CGTCGAACGG GAACAGGCCA CCCTCTCCTA CCGGGACGAG
ACATACCGCT GCGTCATCCG TCGTGAGCTG TACAACGCGG GGAGCGAGCC GATCACCCGC
TACCTCGTAC GTGTCGCCGT TGACCGATAC CCCGGCGACC CCGGCCGCTC CAACCGGCAT
CACCGGGAAC ACCCGCTCAC CTTCGCCGAG CTACAGCTCC ACGCGCACCG ACTGGACGGA
CACGAGCGTG AGGCGATGCA CTGGCGAACC AAGCACGACC GAGACGCGTT CAAGGAGATC
TGGCTGCTCT TCGAGAACAC CGGCCGGCGC TTCCCGCTCT ACCCGGGCGA TCGCGCCACC
ATCGAGTACG CCTACCACGT CGGGCCGGAC AAGTGGGGCC CGTGGTTCCA ACGGGCCGTC
CGGGTGCCCA CCCGGCACCT CGCCGTGCGT CTCGACCTGC CGGCCGCGCT CGACCCACAG
GTCTGGGGCG CAGAGACCTC ACTCTCCGCG GAGGAAGGCC CGCTGCGCAC CCCGGTGGCC
CGCCGAGAGG AGGACGACCG CATCATCTTC GACTGGGCAG TCGACCAGCC GCCGCTGAAC
GGCCGCTACC GGATGCAGTG GCGGTTCCGG GCCCAGCCCG AGGGAGAACT GACAGAAACC
GGCTGGCTGC GGCCAAGCGA CCGGATGCGC GGCCTCGGCA TCCTCCAGCA CGGTGCCGAC
CTACTCCGCC AGCCCACCCG ACCCTTCGAC CTGCCGCGCG AGGACCGAGC TGCCCGGGAC
GTCGTCGACC GGCTCACGGC TACCCTGTTC CGCCTCGACG AGCTGCACCC CTTCAGCAAA
GGGGTCGGGA TCGCCGCCCC CCAACTCGGC ATCGGCCGGG CCGCCGCCGT CGTCCGGCCC
CCGGACCTGT CCGGCGAACC CGTCGTCCTG CTCAACCCGA GGGTGGTCGA CGCCGCACCC
GACACCGACG AACAGTACGA AGGCTGCCTC TCCTTCTTCG ACCAACGGGG CCTCGTGCCC
CGCCCGCTGC GAATCGACGT CGAGCACACC CACATCGACG GCAGCCGGGT CATCACCTCA
TACGAGTACG GCATGGCGCG ACTCGTGGCA CACGAGATCG ACCATCTCGA AGGGCGCCTC
TACGTCGACC GCATGGCCCC GGGCGTGCCC CTGGTGCCGG TCGAGGAATA CCGGCACACC
GGACAGCCCT GGCGCTACTG A
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| Protein sequence | MTTSPLDRAA DSFAVELARH RTGRGLSKKQ LATLMGFDPS YVSHVEGRRH RPTEDFARRA
EAVLEASGAI WQRFRDYDEL RHTRGDRAPH REPPAPGQWL PPGTGLIVER EQATLSYRDE
TYRCVIRREL YNAGSEPITR YLVRVAVDRY PGDPGRSNRH HREHPLTFAE LQLHAHRLDG
HEREAMHWRT KHDRDAFKEI WLLFENTGRR FPLYPGDRAT IEYAYHVGPD KWGPWFQRAV
RVPTRHLAVR LDLPAALDPQ VWGAETSLSA EEGPLRTPVA RREEDDRIIF DWAVDQPPLN
GRYRMQWRFR AQPEGELTET GWLRPSDRMR GLGILQHGAD LLRQPTRPFD LPREDRAARD
VVDRLTATLF RLDELHPFSK GVGIAAPQLG IGRAAAVVRP PDLSGEPVVL LNPRVVDAAP
DTDEQYEGCL SFFDQRGLVP RPLRIDVEHT HIDGSRVITS YEYGMARLVA HEIDHLEGRL
YVDRMAPGVP LVPVEEYRHT GQPWRY
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