Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4512 |
Symbol | |
ID | 5707033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5100065 |
End bp | 5100694 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273926 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_001539275 |
Protein GI | 159040022 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00625137 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGAAC CATGGGTGGT CGGCGTCTCT GGTGCCTCCG GCACGCCGTA CGCGGCTGCT GTCGTGCGGG CGTTGCTCGA CGCAGGGCAA GCCGTAGACC TGATCGTGTC CCGGGCAGCC CGACTGACCA TCCTCGACGA GACCGGTCAA CCGTTTCGCG ACGGGCACTG GGCGGATGAT CTCGCCACCT GGCTGGGGCG CGACCTGAGC GGAACCGACG TCCGGCACTG GCCGGCCGGG GATCTCGCTG CCGGGCCGAG CAGCGGTTCC TACCGGGTAC GCGGGATGGC AGTCGTCCCG GCGAGCACGG CGGCGTGTGC GGGGATCTCG ATCGGGCTCT CCAAGGACCT GTTGCAACGG GCGGCCGAGG TCAACCTGAA GGAGCGCCGC CCGGTGGTGG TCGTGCCCCG GGAGACACCG GTGACCCGCA GTCACCTGGA GCACCTGATC GCGCTGCACG ACGCCGGCGC GGTGGTGCTG CCCGCCAGCC CTGGTTTCTA CGGGGCGGGG GCATCGGCCT CCGCTACCCA GCTGGTCGAC TTCGTTGCCG GCAAGGTGCT GGACACGCTG GGTGTGCCGC ACACGCTCTT CAGGCGCTGG GCGGGCGAGT TGGGCGCGAC GCACGGCTGA
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Protein sequence | MREPWVVGVS GASGTPYAAA VVRALLDAGQ AVDLIVSRAA RLTILDETGQ PFRDGHWADD LATWLGRDLS GTDVRHWPAG DLAAGPSSGS YRVRGMAVVP ASTAACAGIS IGLSKDLLQR AAEVNLKERR PVVVVPRETP VTRSHLEHLI ALHDAGAVVL PASPGFYGAG ASASATQLVD FVAGKVLDTL GVPHTLFRRW AGELGATHG
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