Gene Sare_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4512 
Symbol 
ID5707033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5100065 
End bp5100694 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID641273926 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_001539275 
Protein GI159040022 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00625137 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGAAC CATGGGTGGT CGGCGTCTCT GGTGCCTCCG GCACGCCGTA CGCGGCTGCT 
GTCGTGCGGG CGTTGCTCGA CGCAGGGCAA GCCGTAGACC TGATCGTGTC CCGGGCAGCC
CGACTGACCA TCCTCGACGA GACCGGTCAA CCGTTTCGCG ACGGGCACTG GGCGGATGAT
CTCGCCACCT GGCTGGGGCG CGACCTGAGC GGAACCGACG TCCGGCACTG GCCGGCCGGG
GATCTCGCTG CCGGGCCGAG CAGCGGTTCC TACCGGGTAC GCGGGATGGC AGTCGTCCCG
GCGAGCACGG CGGCGTGTGC GGGGATCTCG ATCGGGCTCT CCAAGGACCT GTTGCAACGG
GCGGCCGAGG TCAACCTGAA GGAGCGCCGC CCGGTGGTGG TCGTGCCCCG GGAGACACCG
GTGACCCGCA GTCACCTGGA GCACCTGATC GCGCTGCACG ACGCCGGCGC GGTGGTGCTG
CCCGCCAGCC CTGGTTTCTA CGGGGCGGGG GCATCGGCCT CCGCTACCCA GCTGGTCGAC
TTCGTTGCCG GCAAGGTGCT GGACACGCTG GGTGTGCCGC ACACGCTCTT CAGGCGCTGG
GCGGGCGAGT TGGGCGCGAC GCACGGCTGA
 
Protein sequence
MREPWVVGVS GASGTPYAAA VVRALLDAGQ AVDLIVSRAA RLTILDETGQ PFRDGHWADD 
LATWLGRDLS GTDVRHWPAG DLAAGPSSGS YRVRGMAVVP ASTAACAGIS IGLSKDLLQR
AAEVNLKERR PVVVVPRETP VTRSHLEHLI ALHDAGAVVL PASPGFYGAG ASASATQLVD
FVAGKVLDTL GVPHTLFRRW AGELGATHG