Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4378 |
Symbol | |
ID | 5705069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4946974 |
End bp | 4948116 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641273800 |
Product | epocide hydrolase domain-containing protein |
Protein accession | YP_001539150 |
Protein GI | 159039897 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.925991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000447633 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGAAA ACAACGCACT CACACCGTTC CGCATCGATA TCCCACAGGC CGACGTCGAC GACCTACGGA ACCGGCTGGC ACACACCCGC TGGCCGATCC CCGTTCCGGG CCGCGACGAG CGCACCGACT TCAGCCGCGG CATCCCGCTG GTGTACCTGA AGGAACTCGC CGAGTACTGG CACGACGAGT TCGACTGGCG TGCGCAGGAG AAGAAGCTCA ACGAGTACGA ACAGTTCACC ACGGTCGTCA ACCGCCAGAC GTTCCACGTC GTCCACGTGC GGTCGACGAA CCCGGCGGCC ACCCCCCTGA TGCTGAACCA CGGCTGGCCT GGCTCGTTCG TGGAGTACCA GCGACTCATC CCGCTGCTGA CCGGTGAGTT CCACGTGGTC ATCCCGTCAC TGCCCGGCTT CGGGTTCTCC ACCCCGCTGT CGGGGACCGG CTGGGAGTTG GCGCGGACGG CGGATGCCTA CGCCGAGATC ATGACGCGCC TCGGCTACGA GAGGTTCGCG GCGCACGGTA CCGACATCGG TTCGGGTACC ACCGGTCGCC TCGCGGCGGT CTACCCGGAG CGCGTCATCG GCACGCACCT CGGCGTCGAC CCCCACTTGC TCGCGTTGGT CGGCGACAAG TTCCCCTACC CCGACGGTCT GTCCGACGAC GAGATCACCC AGATCGAGGC CGTGCGCGCC GAGGACGCGG CCGATCGCGG GTATCTTCTG ATGCACAACC ACCGCCCCGA CACGATCGGC GCGGCGCTCA CCGACTCGCC GGTCGGTCAG CTCGCGTGGA TCGCCGAGAA GTTCAAGACC AGGGCCAACG GCGCCTGGCG GACGCCGGAC GAGTCGGTCG ACCGCGACCA GCTCCTCACG AACATCAGCC TGTACTGGTT CACCCGCGGC GGTGAGTCGA GCGCCCAGTT CTACTACGAG GCCGAGCACT CCGGACTCGA CTTGGTCATG GCCTCAAGCG TGCCGTCCGG ATGGGCCGTG TTCAACTCCA ACCCGCTCGT GCGTCGGGCG ATGGACCCGT GGAAGGCGAT CGGCCACTGG AGCGAGTTCA CCGAGGGCGG TCACTTCCCC GCGATGGATG CGACGGAGTT GCTCGCGGAC GACATCCGCA CCTTCTTCCG CGGCATTGCC TGA
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Protein sequence | MNENNALTPF RIDIPQADVD DLRNRLAHTR WPIPVPGRDE RTDFSRGIPL VYLKELAEYW HDEFDWRAQE KKLNEYEQFT TVVNRQTFHV VHVRSTNPAA TPLMLNHGWP GSFVEYQRLI PLLTGEFHVV IPSLPGFGFS TPLSGTGWEL ARTADAYAEI MTRLGYERFA AHGTDIGSGT TGRLAAVYPE RVIGTHLGVD PHLLALVGDK FPYPDGLSDD EITQIEAVRA EDAADRGYLL MHNHRPDTIG AALTDSPVGQ LAWIAEKFKT RANGAWRTPD ESVDRDQLLT NISLYWFTRG GESSAQFYYE AEHSGLDLVM ASSVPSGWAV FNSNPLVRRA MDPWKAIGHW SEFTEGGHFP AMDATELLAD DIRTFFRGIA
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