| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4275 |
|---|
| Symbol | |
|---|
| ID | 5706987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4852060 |
|---|
| End bp | 4852845 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641273694 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_001539047 |
|---|
| Protein GI | 159039794 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.096784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00335965 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCAC GTACGGTCCT CACCATCGCC GGGTCGGATT CCGGCGGCGG CGCCGGAATC
CAGGCCGACC TCAAGGTCTT CGCGGCGCTG GGAGCCTACG GCACCAGTGT CGTCACCGCC
GTCACCGCCC AGAACACCCG GGGTGTCGAC GCCGTCCTGT CGCTGCCCCC ACGGACGGTG
ACCGACCAAC TGGACAGCGT GCTCACCGAC TTCGCGGTGC GCGCGGTGAA GACCGGCATG
CTCGGTAGCC AGGCGGTCGC GGACGCGGTC GTCGAGGCGG CGAGGGACGA CCGGCTGCCG
CACCTTGTTG TCGACCCGGT GCTGGTCGCC ACCAGCGGGC ACGCGTTGGG CGCGGTGGCG
ACCGTGGAGC GGTTGCTGCC GTTTGCCCGG GTGGCGACGC CGAACTGTGC GGAGGCCGCG
GCCCTCACCG GGGGCCGGGT CGACACGGTC GAGGAGATGG TCGTCGCCGC GGCGGCGCTC
AGCGCGGGCG GACCGGACTA CGTCGTGGTC ACCGGTGGGG ACATGGACGC GGAAACGGCG
GTCGACGTGC TCCATGGCGA CGGCGGCACC ACCCTGTTCC GCGCTCCGCG GGTGTCGACC
CGGCACAACC ACGGGACCGG GTGCTCGTTC TCGGCGGCTG TCACCGTCCG GCTCGCACTC
GGCGACTCGG TGCCGGCGGC CGTCGCGGCG GCCAAGAAAT ACGTGACCGG GGCGCTGCTC
GGCGCTCGGG ATTGGGAGTT GGGCGCGGGA CGCGGTCCGC TCGATCACTT CAGCTGGTCC
GCCTGA
|
|---|
| Protein sequence | MTPRTVLTIA GSDSGGGAGI QADLKVFAAL GAYGTSVVTA VTAQNTRGVD AVLSLPPRTV
TDQLDSVLTD FAVRAVKTGM LGSQAVADAV VEAARDDRLP HLVVDPVLVA TSGHALGAVA
TVERLLPFAR VATPNCAEAA ALTGGRVDTV EEMVVAAAAL SAGGPDYVVV TGGDMDAETA
VDVLHGDGGT TLFRAPRVST RHNHGTGCSF SAAVTVRLAL GDSVPAAVAA AKKYVTGALL
GARDWELGAG RGPLDHFSWS A
|
|---|
| |