| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4267 |
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| Symbol | |
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| ID | 5705772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4843103 |
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| End bp | 4844281 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273686 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001539039 |
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| Protein GI | 159039786 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.033061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCCCA TCCGCTCCGC AACCGCGGCG CTCACCTCGG CCGTCCTGGC CACCACGCTC
ACCGCCTGCC AGTTCGGCGC GGAGGAGCAA GACACCAGCC CCATCATCGT CGCCGCCGAC
CTCGAACTGT CCGGGGCCGG GGCACCGGTG GGCGAAACGT ACCAGCGCGC CCTCGAGCTC
AAGGCCCAAC AGCTCAACTC GTCCGGCGCC CTGAACGGAC GGCGGATCGA GCTGCGAGTC
AGGGACAACC GTTCCGACGC GAGCGAATCC CTTCGCAACG TCAATGACTT CGGTGCGGAC
GCACAGGTCA GCGCGATCAT CATGGGCGGT TGCAACGAAT GCGCGGTGGG CGCGGTAGGC
ACTATCGACG ATCAGCGCGT GCCCATGGTC GCGCTGGCTC CCGCCGACGC CATCGCCAGC
CCGGCGATGG AGCGTCGATA CGTGTTCAAA CTGGCCCCGA ACGCGCCCGA CAGCGCGGAG
GCCCTCGCGA TCGAGCTTCG TCGCAACCAG ATCCGCGAGG TGGGTGTGCT GCGCAGCGAA
GACGACTTCG GCCTGGAGGG GCTCACCGCA CTCCAGGCCG CGCTGGAGAA GGCGGATATC
GAGGTCCTGA GTGTGGGAAC CGTCCGCGCC ACCGACACCG ACGTCTCCAA CCAGGTCACG
TCGCTGATCA AGGACAGGCC GGACGCGCTG GTGCTGTGGA CCCGCGCGGA GCAGGCCGGC
CTCGCGGCGC TGGCGGCGCG CAAGGCCGAC TTCGACGGCT CGCTCTACTT CGACGCCTCG
GCGGCCGGAA ATCTCTTCCT CGGCACGACC GCCCAGGCCT CGGAGAACGC CACCATGGTC
TTCACCCAGA CCATGGTGAT TGATGACGTG ATCGCCACGA CGCCAGCGAA GGCGGCACGG
CGTCAGTGGT TTCAGGACTA CACCGCACGC TTCGGCGGAT ACCACGGCTC GTCCTCGTTC
GCCGCCGATG CCCTCCAACT CATCGCCGAC GCTGTCCTGC GGTCGGAGGG TGAGCCCGGC
AAACCCAACC GTGAGGGCAT CCGCAACGTG CTGGAAACCT CTCAGCTGGA CGGACTCTCC
GGCCCGATCC GACTCACTCC GGACAACCAC TCCGGTCTCA TGCCACAGGC GTTGACCACA
CTGGTCGCCC GCAACGGCCG TTGGCGCCTC GCCGGGTGA
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| Protein sequence | MSPIRSATAA LTSAVLATTL TACQFGAEEQ DTSPIIVAAD LELSGAGAPV GETYQRALEL
KAQQLNSSGA LNGRRIELRV RDNRSDASES LRNVNDFGAD AQVSAIIMGG CNECAVGAVG
TIDDQRVPMV ALAPADAIAS PAMERRYVFK LAPNAPDSAE ALAIELRRNQ IREVGVLRSE
DDFGLEGLTA LQAALEKADI EVLSVGTVRA TDTDVSNQVT SLIKDRPDAL VLWTRAEQAG
LAALAARKAD FDGSLYFDAS AAGNLFLGTT AQASENATMV FTQTMVIDDV IATTPAKAAR
RQWFQDYTAR FGGYHGSSSF AADALQLIAD AVLRSEGEPG KPNREGIRNV LETSQLDGLS
GPIRLTPDNH SGLMPQALTT LVARNGRWRL AG
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