Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4237 |
Symbol | |
ID | 5708087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4810476 |
End bp | 4811291 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273656 |
Product | ABC transporter related |
Protein accession | YP_001539009 |
Protein GI | 159039756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.413873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.20024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCGA CCCCCCTGCT GGAGCTGCGC GGGATCGACA AGAGTTTCGG TCCCGTCCAG GTCCTGCGTG ACGTCGCCTT CTCCGCCTTC CCCGGGCAGG TGACCGCGCT GGTCGGCGAC AACGGCGCCG GCAAGTCCAC CCTGGTCAAG TGCATCAGCG GCATCTACCC GACCGACGCC GGAGAGTTCC TCTTCGACGG ACGTCCGGTG AGCATCCACA ACCCCCGCGA CGCCGCCGCA CTCGGCATCG AGGTCGTCTA CCAGGACCTC GCGCTCTGCG ACAACCTCGA CATCGTGCAG AACATGTTCC TTGGCCGAGA GAAACGCAGC GGCATCGTGC TCGACGAGCC GTCCATGGAA CAGATGGCCG CGGACACACT CGCGGGGCTC TCCGTCCGCA CTGTCAAGTC GCTACGCCAG CAGGTGTCCA GCCTCTCCGG AGGCCAGCGG CAAACCGTCG CGATCGCCAA GGCGGTGCTC TGGAACAGCA AGGTCGTCAT CCTCGACGAG CCCACCGCCG CGCTCGGTGT CGCGCAGACC GCCCAGGTGC TCGAGTTGGT CCGCCGGCTG GCGGACAACG GCCTCGCGGT AGTGCTCATC TCACACAACA TGAACGATGT CTTCGCCGTC TCCGACCGGA TCGCCGCGCT CTATCTGGGC CAGATGGTCG CCCAGGTGAA GACCACCGAC ATCACCCATG CCCAGATCGT CGAACTGATC ACCGCCGGCC GCTCCGGTGC GCTGGGGCTC GGCTCGGGCA ACGGACCGAA CGACACCGGC GGGGAGACCG CCGCCGCCCC GGGAGCCGCC CGATGA
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Protein sequence | MSATPLLELR GIDKSFGPVQ VLRDVAFSAF PGQVTALVGD NGAGKSTLVK CISGIYPTDA GEFLFDGRPV SIHNPRDAAA LGIEVVYQDL ALCDNLDIVQ NMFLGREKRS GIVLDEPSME QMAADTLAGL SVRTVKSLRQ QVSSLSGGQR QTVAIAKAVL WNSKVVILDE PTAALGVAQT AQVLELVRRL ADNGLAVVLI SHNMNDVFAV SDRIAALYLG QMVAQVKTTD ITHAQIVELI TAGRSGALGL GSGNGPNDTG GETAAAPGAA R
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