Gene Sare_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4237 
Symbol 
ID5708087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4810476 
End bp4811291 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID641273656 
ProductABC transporter related 
Protein accessionYP_001539009 
Protein GI159039756 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.20024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCGA CCCCCCTGCT GGAGCTGCGC GGGATCGACA AGAGTTTCGG TCCCGTCCAG 
GTCCTGCGTG ACGTCGCCTT CTCCGCCTTC CCCGGGCAGG TGACCGCGCT GGTCGGCGAC
AACGGCGCCG GCAAGTCCAC CCTGGTCAAG TGCATCAGCG GCATCTACCC GACCGACGCC
GGAGAGTTCC TCTTCGACGG ACGTCCGGTG AGCATCCACA ACCCCCGCGA CGCCGCCGCA
CTCGGCATCG AGGTCGTCTA CCAGGACCTC GCGCTCTGCG ACAACCTCGA CATCGTGCAG
AACATGTTCC TTGGCCGAGA GAAACGCAGC GGCATCGTGC TCGACGAGCC GTCCATGGAA
CAGATGGCCG CGGACACACT CGCGGGGCTC TCCGTCCGCA CTGTCAAGTC GCTACGCCAG
CAGGTGTCCA GCCTCTCCGG AGGCCAGCGG CAAACCGTCG CGATCGCCAA GGCGGTGCTC
TGGAACAGCA AGGTCGTCAT CCTCGACGAG CCCACCGCCG CGCTCGGTGT CGCGCAGACC
GCCCAGGTGC TCGAGTTGGT CCGCCGGCTG GCGGACAACG GCCTCGCGGT AGTGCTCATC
TCACACAACA TGAACGATGT CTTCGCCGTC TCCGACCGGA TCGCCGCGCT CTATCTGGGC
CAGATGGTCG CCCAGGTGAA GACCACCGAC ATCACCCATG CCCAGATCGT CGAACTGATC
ACCGCCGGCC GCTCCGGTGC GCTGGGGCTC GGCTCGGGCA ACGGACCGAA CGACACCGGC
GGGGAGACCG CCGCCGCCCC GGGAGCCGCC CGATGA
 
Protein sequence
MSATPLLELR GIDKSFGPVQ VLRDVAFSAF PGQVTALVGD NGAGKSTLVK CISGIYPTDA 
GEFLFDGRPV SIHNPRDAAA LGIEVVYQDL ALCDNLDIVQ NMFLGREKRS GIVLDEPSME
QMAADTLAGL SVRTVKSLRQ QVSSLSGGQR QTVAIAKAVL WNSKVVILDE PTAALGVAQT
AQVLELVRRL ADNGLAVVLI SHNMNDVFAV SDRIAALYLG QMVAQVKTTD ITHAQIVELI
TAGRSGALGL GSGNGPNDTG GETAAAPGAA R