Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4236 |
Symbol | |
ID | 5708086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4809274 |
End bp | 4810371 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641273655 |
Product | hypothetical protein |
Protein accession | YP_001539008 |
Protein GI | 159039755 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0383732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG GCTTCCTCGC CGCTGCCGCC GTCGGCCTGC TGGCCACCGG CAGCATGACG GCCTGTGGCG ACAACTCCAC CGACGGGGAC CAGACCGGTT CCGGCAAGAC CCCGAAGATC GGCGTGATCC TTCCGGACAG CAAGTCCTCC GCCCGTTGGG AAGGCGCCGA CCGCAAGTTC CTCCAAGAGG CATTCGCGGA GGCCGGGGTC GAGGCCGACA TCCAGAACGC GCAGGGTGAC AAGACCCAGT TCCAGACGAT CGCCGACCAG ATGATCACTA AGGGTGTCAC CGCACTGATG ATCGTCAACC TGGACTCCGG CACCGGCAGA GCCGTCCTCG ACAAGGCCAA GTCGCAGGGT GTCGCCACCA TCGACTACGA CCGACTGACC CTCGGTGGCT CGGCGGAGTA CTACGTCAGC TTCGACAACG AGGCCGTCGG CAAACTTCAG GGTGAAGGCC TCGTCAGGTG CCTCACGGAC AGCGGCGTCG AGAACCCGTC GATCGCGTAC CTGAACGGCT CGCCGACCGA CAACAACGCC ACTCTGTTCA GGAACGGCTA CGACTCGGTC CTGAAGCCGA AATTCGACGC CGGGGAGTAC CAACAGGTCG CGGACGACTC CGTGCCGGAC TGGGACAACG CGCAGGCCGC CACCATCTTC GAACAGCAAC TCACCAAGAC TGGCGGCAAG ATCGACGGGG TGCTCGCGGC CAACGACGGC CTCGGCAACG CCGCGATCTC GGTGCTGAAG AAGAACAAAC TCAACGGCAA GGTCCCGGTC ACCGGCCAGG ACGCCACCCC GCAGGGCCTA CAGAACGTTC TCGCCGGGGA CCAGTGCATG ACCGTCTACA AGGCGATCAA GGAAGAGGCC AGCGCCGCTG CCTCCCTGGC CATCGCGCTC GCCCAGGGAG AGCGGAAGGA GACCGGCCAG ACGGTCAAGG ACCCGGAGAG TGGCCGGGAC GTACCCGCCG TGCTGCTCAC CCCCACGGCG GTCTACAAGG AAAACGTCAA GGACATCATC GCCGACGGCT TCGTGACCAA GGACGAGATC TGCACCGGGG CCTACGCCCC GCTCTGCGCG AGCGCCGGCA TCAGCTGA
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Protein sequence | MRKGFLAAAA VGLLATGSMT ACGDNSTDGD QTGSGKTPKI GVILPDSKSS ARWEGADRKF LQEAFAEAGV EADIQNAQGD KTQFQTIADQ MITKGVTALM IVNLDSGTGR AVLDKAKSQG VATIDYDRLT LGGSAEYYVS FDNEAVGKLQ GEGLVRCLTD SGVENPSIAY LNGSPTDNNA TLFRNGYDSV LKPKFDAGEY QQVADDSVPD WDNAQAATIF EQQLTKTGGK IDGVLAANDG LGNAAISVLK KNKLNGKVPV TGQDATPQGL QNVLAGDQCM TVYKAIKEEA SAAASLAIAL AQGERKETGQ TVKDPESGRD VPAVLLTPTA VYKENVKDII ADGFVTKDEI CTGAYAPLCA SAGIS
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