Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4107 |
Symbol | |
ID | 5706534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4665805 |
End bp | 4666638 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273533 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_001538888 |
Protein GI | 159039635 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0411446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAACTTC TGCACTCGGG CAAGGTCCGG GACGTCTACG CTGACGGCGG CGACCTGATC CTGGTCGCCT CCGACCGCAT CTCTGTCTAC GATGTGGTGC TGCCGACGCC GATTCCGGAC AAGGGCAAGC TTCTCACGGC GCTCTCCCTG TGGTGGTTCG ACCAGCTCGC TGAGCTGGTG CCGAACCATG TGCTCTCGGC GACCGACGTG CCGCCCGAGT TCGCTGGCCG GGCGATCCGG TGCCGCCGCC TGGACATGGT TCCGGTGGAG TGCGTCGCCC GGGGCTATCT GACCGGTGGT GGCTTCGCCG AGTACCAGCG CACCGGAGCG GTCTCCGGTG TCGAACTGCC GCGCGGGTTG GTCGAGGCGG CCGCCCTGCC TGAGCCGGTC TTCACCCCCT CCACCAAGGC ACCGGTGGGC GAGCACGACC AGCCGATCAC CTTCGGCGGG GTGGTGGACA GGGTCGGGGC GGAGACCGCC GAGCGGCTGC GCCGAATCAC GCTCGACGTC TACCGGCGGG GAGCCGAACT GGCCGCCGGT AGGGGGATCC TCATCGCCGA CACCAAGATC GAGCTGGGCT GGGCCGCCGA TGGCACGCTG ACAGTCGGCG ACGAGCTGCT GACCTCGGAC TCGTCCCGGT TCTGGCCGGT CGAGTCCTAC CAGCCGGGGC GCGCCCAGTT CTCGTACGAC AAACAGTACG TGCGGGACTG GGCCACCAGG AGCGGGTGGG ACAAGCAGAG CCCGGCGCCG GAGCTGCCGG GTGAGGTCGT TGACGCTACC CGCGCCCGCT ACGTCGACGT CTACGAGAAA CTCACCGGCA AGCGCTGGGG CTGA
|
Protein sequence | MELLHSGKVR DVYADGGDLI LVASDRISVY DVVLPTPIPD KGKLLTALSL WWFDQLAELV PNHVLSATDV PPEFAGRAIR CRRLDMVPVE CVARGYLTGG GFAEYQRTGA VSGVELPRGL VEAAALPEPV FTPSTKAPVG EHDQPITFGG VVDRVGAETA ERLRRITLDV YRRGAELAAG RGILIADTKI ELGWAADGTL TVGDELLTSD SSRFWPVESY QPGRAQFSYD KQYVRDWATR SGWDKQSPAP ELPGEVVDAT RARYVDVYEK LTGKRWG
|
| |