Gene Sare_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4042 
Symbol 
ID5705023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4598685 
End bp4600892 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content70% 
IMG OID641273468 
ProductMMPL domain-containing protein 
Protein accessionYP_001538823 
Protein GI159039570 
COG category[R] General function prediction only 
COG ID[COG2409] Predicted drug exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.087579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC TGCTCTACCG GCTCGGCCGC GGTGCGATGC GCCGACGACG CGTCGTCGCC 
GCACTCTGGC TTGTCGTACT CGCCGGTCTC GGCCTGGCGG CCCTGACCCT GCGGGGACCG
ACGTCCAGCG ACTTCACGAT GCCCGGCACC GAGTCGCAGC TTGCGAAGGA CCTGCTCGAG
GAGCAGTTCC CGGCCGCTAG TGGTGCCACC GGCACCATCG CGCTCAAGGC ACCACAGCCA
GGCCTGCTCG GCACCCCGCA GGGCCAGGCG GTGGCCACCG AAGTCACCCA GGAGGCCGCG
ACACTGCCCG GCGTGGTCGG CGCGGTGGAT CCGCTCACGG CCCAGGCCAT CAGCCCCGAC
GGCCAGTACG GGCTGATCCA GGTCCAGTTC GCCGAGGGCG CGGACAAGGT CACCGACGAG
CAACGGGAGG CGTACGAGCA GGTCGGCGCC GCAGCCGAGG CCCAGGGCTG GCAGGTGGCA
CCCGGCGGCG AGGTGCTCAA CAGCGAACCG GCGGCTGGCT CGTCCGAGGT GATCGGTGTG
GCGATCGCGG CGATCGTCCT GGTGGTCACC TTCGGCTCGC TGGTGGCGGC CGGGATGACG
ATGCTGAACG CGCTGATCGG GGTCGGCGTC GGCATGGCCG GTCTGTACGC GCTGAGCGGC
ACGGTCGAGT TGACCAGCAC CGCGCCGATC CTCGCCCTGA TGCTCGGCCT CGCGGTCGGC
ATCGACTACT CGCTGTTCAT CACTTCCCGC TACCGCCAGA ACCTGCTCGA CGGATTGCCG
CCGGACGAGG CGGTCGGCCG GGCGGTCGGC ACGGCCGGCT CGGCTGTGCT CTTCGCCGGC
GCCACCGTGG TCATCGCGCT GACCGGTCTG GCGGTGGTGA ACATCCCGTT CCTGACCGTC
ATGGGTCTGG CCGCTGCCGG GACGGTCGTC GTCGCCGTGC TGGTCGCCCT CACCCTTGCG
CCGGCACTGC TCGGCTTCGC GGGCCGGCGG GTGCTCCGCC GTGAGCAACG CCACCGCTAC
GGCATCGCCT CGGCGGAGTC CGAGACGGCC GAATCCGAGG CGGCGGCCCT CACCGAGGAC
CGCTCCACGT TCGGCTTCCG TTGGGCTCGC CTGGTCATCC GGTTCCGGGT ACCGGTGATC
CTGGTTGCCC TGCTCGGACT GGGCGTGCTC GCGCTGCCCA CCTCCGACAT GCGGCTGGCC
CTCCCGGATC AGGGGACCGC ACCGGTCGGC TCGCCGGCCC GGGTCTCCAA TGACCTGATC
AGCGAGGGCT TCGGGCCAGG CTTCACGGGT CGCCTGGCAG TCGTGGTGGC CGGGGACAGC
CCAGAGGCGA CGGCCGCGGC CGTGCCCCAG GTCACGGCCT TGGTCCAACG GACTGACAAC
GTCCTGGCCG TGGCGCCGCC GCAGCTCAGT CCGGATGGGC GGACGGCCCT GATCGGCGTG
GTCCCCGAGA CCGGGCCGAC GGACCCGGCA ACCGAGACGG TGGTGGACGA CATCCGCGGC
TCGGTCGGCG GCATCCAGGG CGCGGACGTG CTACTCACCG GGGTAACCGC GATTGGAATC
GATGTCTCCG AAAAACTCGC CGACGCGCTG CCGGTCTACC TGCTCCTGGT GGTCGGGCTC
TCGATCGTGC TGCTGATGCT GGTGTTCCGC TCGCTGCTGG TGCCGGTGAA GGCCGCACTG
GGCTTCCTGC TCACCGTGGC GGCCACCTTC GGGCTCACCG TCGCGGTCTT CCAGCAGGGG
CACCTCGCCG ACCTGGTCGG TCTGGACACA CCGGGGCCGC TGATCAGCTT CCTGCCGATC
CTGCTCATCG GTATCCTCTT CGGCCTGGCC ATGGACTATG AGGTCTTCCT CGTCTCCCGG
ATGCGGGAGG ATTTCGTCCA CGGCGACACT GCCCAGCAGG CCACTGTCAA CGGGATGGGT
CACGGCGCCC GGGTGGTCAC CGCGGCCGCG CTCATCATGA TCTCCGTCTT CGGTGGCTTC
ATCTTCATGG ACGACCCCGT CATCAAGTCG ATGGGCTTCG CGCTGGCAGT TGGCGTCGCC
ATCGACGCGT TCGTGGTGCG GATGACGATC GTGCCGGCGG TCATGTCCCT GCTCGGCGAC
GCCGGGTGGT GGCTGCCACG CTGGCTGAAC CGGGTCCTAC CCAACGTGGA CGTCGAGGGT
GAGGGCCTGC GCAACCACCT GGCGGAGCAG GAACCCGCCC GCACCTGA
 
Protein sequence
MATLLYRLGR GAMRRRRVVA ALWLVVLAGL GLAALTLRGP TSSDFTMPGT ESQLAKDLLE 
EQFPAASGAT GTIALKAPQP GLLGTPQGQA VATEVTQEAA TLPGVVGAVD PLTAQAISPD
GQYGLIQVQF AEGADKVTDE QREAYEQVGA AAEAQGWQVA PGGEVLNSEP AAGSSEVIGV
AIAAIVLVVT FGSLVAAGMT MLNALIGVGV GMAGLYALSG TVELTSTAPI LALMLGLAVG
IDYSLFITSR YRQNLLDGLP PDEAVGRAVG TAGSAVLFAG ATVVIALTGL AVVNIPFLTV
MGLAAAGTVV VAVLVALTLA PALLGFAGRR VLRREQRHRY GIASAESETA ESEAAALTED
RSTFGFRWAR LVIRFRVPVI LVALLGLGVL ALPTSDMRLA LPDQGTAPVG SPARVSNDLI
SEGFGPGFTG RLAVVVAGDS PEATAAAVPQ VTALVQRTDN VLAVAPPQLS PDGRTALIGV
VPETGPTDPA TETVVDDIRG SVGGIQGADV LLTGVTAIGI DVSEKLADAL PVYLLLVVGL
SIVLLMLVFR SLLVPVKAAL GFLLTVAATF GLTVAVFQQG HLADLVGLDT PGPLISFLPI
LLIGILFGLA MDYEVFLVSR MREDFVHGDT AQQATVNGMG HGARVVTAAA LIMISVFGGF
IFMDDPVIKS MGFALAVGVA IDAFVVRMTI VPAVMSLLGD AGWWLPRWLN RVLPNVDVEG
EGLRNHLAEQ EPART