Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4031 |
Symbol | |
ID | 5705011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4584578 |
End bp | 4587871 |
Gene Length | 3294 bp |
Protein Length | 1097 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273456 |
Product | acriflavin resistance protein |
Protein accession | YP_001538812 |
Protein GI | 159039559 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00115859 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGCTGC TCGCCAGATT CAGTCTCGCC AACCGAGGGC TCGTCGTCCT CATCGCGGTG GTAACCACGG TGTTCGGAGC GTTCGCCGTC CCGTCGCTGA AGCAGCAACT CCTACCGTCG CTGGAGTTCC CGGCCGCGTT CATCGTGGCG TCGTACCCGG GCGCCGGCCC GGAGGCCGTC GAGTCGCAGG TCACCGAACC GATCGAGAAC AGCCTGCAGG GCACCACCGG GCTGGAGAAG ATCACCTCGA CGTCGCGTGA GGGGTCGGCG ACCATTCAGG TGGAGTACGA GTTCGGTACC GACGTGGACG CCGTGGTCAA CCAGCTCCAG GCCGCGCTCA ACCAGGCTGA CGTCCAACTG CCGGAGGGGG TCGACCCACA GGTCGTCGCC GGTGGCACGG ACGACCTGCC GGCGGTGGTG CTCGCCGCCT CCGGCGGAGA AGACCAGCGG GTGCTCGGCG AGCGGTTGCG CGACACGGTC GTACCGGAAC TGGCCGCGAT CGAGGGTGTC CGGACGGTCG ACATGACGGG TACCCGCGAC GAGGTGGTGG TCATCACCCC GAATCCGACG AAGCTTGCGG CGGCCGGGAT CCGGCCCAGC GCCTTCGGCG GGGCACTGCG GGCCAACGGG GTCACCGTTC CGGCCGGCGC GGTCGTCGAC GGCCAGCAGA CTCTCCCGGT GCAGGTCGGC ACCCCGCTTA CCACACTTGA CGAGCTGCGC GGCATCATTC TCACGGTGGC ACCGGCCGCC CCGGTGCGAC TCGGCGATGT GGCGACGGTG GAGGAGGGGC TCTCGCCGGC CACCGCGATC ACGCGTACCA ACGGCCAGGA CAGCCTGGGC ATCGCCGTGA CCGCGACTCC GGACGGCAAC GCGGTGGAGA TCTCCCAAGA GATCCGGGAG CGGCTCGCGG GCCTGCGCGT CGCCTCCGGA GCCGAGCTGA CCGTCGTCTT CGACCAGGCC CCCTTCGTCG AGAAGTCAAT CAAGAGCCTC ACCACCAAGG GCCTGATCGG TCTCGTGATG GCGGCGGTGG TGATCCTGGT CTTTCTCCTC TCGGTACGCT CCACCGTCGT CACGGCGGTC TCCATTCCGT TGTCGGTGCT GGTCGCGCTG ATCGCGCTCT GGGTCGGCGA CTACTCGCTC AACCTGCTCA CCCTTGGCGC CCTGACCATC GCCGTCGGCC GTGTGGTGGA CGACTCGATT GTGGTGCTGG AGAACATCAA ACGGCACCTG GAGTACGGGG AGTCGAAACA GGAGGCCATC CCTACCGCGG TCCGTGAGGT GGCCGGAGCG GTTACCGCCT CCACGCTCAC CACGGTCGCC GTGTTCGCGC CGATCGCGCT GGTCGGCGGG TTCGTCGGGC AGCTCTTCAC GCCGTTCGCG ATCACCGTCA CGGTTGCGCT GCTCGCCTCA CTGTTGGTGT CGCTGACCCT GATCCCGGTA CTGGCGTACT GGTTCCTTCG GCCGGCTGCC GGGACGGCGG ACGAGGCGGC AGTGCGCCGG ACAGCGGAGG AAAAGGAGCT GCGCAACCCG CTGCAACGCG CCTACCTGCC GGTCATCGCC CTTGCCACCC GGGATCGGGC GACTCGGTGG ATCACTCTCG GACTCGGCGC CCTGCTCCTC CTCGGCACGT TCGGCCTGTC TCGTCAGCTG GAGACGAACT TCCTCGACGA CTCCGGTCAG GACACGATGA CCATCACCCA GGAACTACCG GCGGGCACCG GTCTGGCCGG GACGGACGCG GCCGCCCGGC AGGTGGAGGA GGTACTGGCT GGCACCGAGG GTGTCGAGAC GTACCAGGTG ACGGCTGGCG CGGGTGGCAC CCCGTGGGCC GGCGGCGGCA ACAACGTGGC GACCTGGTCA CTCACTCTCG GCGGGGACAC CGACGCCGAG AAAGCGCGTG GTGTCCTGCG CGGCAAGTTC GACGAACTCG GTGAGGAGGC TGGCGAGTTC CGGTTTGGGG CCGGGCAGGG CGGTGCCGCC GCGAATCAGC TTGAGGTGAT CGTTCAGGCC GCCGATCCGG CGACGCTGAC CCCCGCGATC GACGAGGCGG CGGCCGCGAT GGCGGGGCTC ACCGGCGTCG AGGATGTGAC CACCAGCGTG GCCAGCCAGG TCGGACAGGT CGAGGTCAGG GTCGATCGCG CGAAAGCCGC GGCGGCAGGG CTCACCGAGG CAGCGGTCGG GCAACTGGTC GCACAGGCGT TCCGGGGCGC CCCGTTGGGA CAGCTCACGA TCGAGGGTGA GCAGCGGGAC GTGGTACTGC GAACCACCCA ACCGCCGCTG TCGACAGAGC AACTGCGGGC GTTGCCGGTC GGCGTGGTCA CGCTGGGTGC CGTCGCCGAC GTCAGTGAGG TTCTGGGCCC GCAGCAGATC ACCCGGATCG ACGGGGAGCG CAGTGTCTCG GTTACCGGCA CGGCCACGGG CTCGAACCTC GGTGAGACCA GTCAGGAGCT TCAGGAACGG CTGGACGCGA TCGACATTCC CGGGGCCACC TTCGTCGTCG GTGGGGTCAG CGCGGACCAG GAGGAGGCAT TCGCCGATCT GGGTTTGGCG GTACTCGCCG CAATCGCGAT CGTTTTCCTG ATCATGGTTG TGACGTTCCG TAGCCTGACC CAGGCGTTGA TTCTGCTGGT CTCGGTGCCG TTCGCGGCGA CCGGCGCGGT CGGGCTGCTG CTGGTGACTG GCACCCCGCT GGGCGTGCCG GCGCTGATCG GTGTCCTCAT GCTGGTCGGC ATCGTGGTGA CCAACGCGAT TGTGCTGCTC GACCTGGTGA ACCAGTACCG AGCCCAGGGG CTGGGGATCC GCGAGGCGGT GGTCGAGGGC GGCCGGCGGC GGCTGCGTCC GATCCTGATG ACCGCGGTCG CGACCATCTT CGCGCTGCTG CCGATGGCCC TGGGGCTCAC CGGTGAGGGC GGCTTCATCT CGAAGCCGTT GGCGATCGTG GTGATCGGGG GTCTGCTCAG TTCGACGCTG CTCACCCTGG TCCTGGTACC GACCCTGTAC GTCTTGGTGG AGCACGCCAA GGAGTCGATC CGGGACCGAT GGGCCGGCCG TCGGGGCGGG CCGCTGGAGG CTGCGCCGTC GGCCGTCACC CCGCCATTGG CCGAACCGGC GGCGACACCG GTCTCCAGCC GCTCCGGGGC GGACGGATCG GGCGGTGGCA CCGCCGGGAG CGCCGGCGCC GGTGACGAGC CCGACCGGCC CTCACCCTCG CCTGCGCTGG TCGACGGGAC CGACCAGTTC GAGGTGCTCC GCCTTCCCCG CAGCCGTACC TCCCCGCTTC CGCCCACGGA GTAA
|
Protein sequence | MSLLARFSLA NRGLVVLIAV VTTVFGAFAV PSLKQQLLPS LEFPAAFIVA SYPGAGPEAV ESQVTEPIEN SLQGTTGLEK ITSTSREGSA TIQVEYEFGT DVDAVVNQLQ AALNQADVQL PEGVDPQVVA GGTDDLPAVV LAASGGEDQR VLGERLRDTV VPELAAIEGV RTVDMTGTRD EVVVITPNPT KLAAAGIRPS AFGGALRANG VTVPAGAVVD GQQTLPVQVG TPLTTLDELR GIILTVAPAA PVRLGDVATV EEGLSPATAI TRTNGQDSLG IAVTATPDGN AVEISQEIRE RLAGLRVASG AELTVVFDQA PFVEKSIKSL TTKGLIGLVM AAVVILVFLL SVRSTVVTAV SIPLSVLVAL IALWVGDYSL NLLTLGALTI AVGRVVDDSI VVLENIKRHL EYGESKQEAI PTAVREVAGA VTASTLTTVA VFAPIALVGG FVGQLFTPFA ITVTVALLAS LLVSLTLIPV LAYWFLRPAA GTADEAAVRR TAEEKELRNP LQRAYLPVIA LATRDRATRW ITLGLGALLL LGTFGLSRQL ETNFLDDSGQ DTMTITQELP AGTGLAGTDA AARQVEEVLA GTEGVETYQV TAGAGGTPWA GGGNNVATWS LTLGGDTDAE KARGVLRGKF DELGEEAGEF RFGAGQGGAA ANQLEVIVQA ADPATLTPAI DEAAAAMAGL TGVEDVTTSV ASQVGQVEVR VDRAKAAAAG LTEAAVGQLV AQAFRGAPLG QLTIEGEQRD VVLRTTQPPL STEQLRALPV GVVTLGAVAD VSEVLGPQQI TRIDGERSVS VTGTATGSNL GETSQELQER LDAIDIPGAT FVVGGVSADQ EEAFADLGLA VLAAIAIVFL IMVVTFRSLT QALILLVSVP FAATGAVGLL LVTGTPLGVP ALIGVLMLVG IVVTNAIVLL DLVNQYRAQG LGIREAVVEG GRRRLRPILM TAVATIFALL PMALGLTGEG GFISKPLAIV VIGGLLSSTL LTLVLVPTLY VLVEHAKESI RDRWAGRRGG PLEAAPSAVT PPLAEPAATP VSSRSGADGS GGGTAGSAGA GDEPDRPSPS PALVDGTDQF EVLRLPRSRT SPLPPTE
|
| |