| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4000 |
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| Symbol | |
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| ID | 5704886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4550402 |
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| End bp | 4552189 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641273425 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001538781 |
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| Protein GI | 159039528 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.257206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0011144 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGAGT TCGCCAGTGT GGGTGTGGTG GGTCTGGGCA CCATGGGTAC CGGCATCGTC
GAAGTTTTCG CCCGTAACGG CATCGACGTC GTCGCGGTCG AGGTGGCCGA GCCGGCGCTG
GAGCGTGGTC GGGCCACCCT GACCGGCTCA ACCGACCGGG CGGTGGCCAA GGGCAAACTC
GCGGCGGCTG ACCGGGACGC GCTCCTGGCC CGCGTCGACT GGCAGGTCGG GCTGGATGCG
TTGCACTCGG TGGACCTGGT GATCGAGGCC GTTCCCGAGC ACCTCGACCT GAAACAGCGG
ATCTTCGCGG AGCTGGATCG AGTCTGCAAG CCCGAGGCGG TCCTCGCCAC CAACACCTCG
TCGCTGTCCG TCACCGAGAT TTCGGTGGCC ACGACCCGCC CCAACCAGGT CCTCGGCATC
CACTTCTTCA ACCCGGCGCC GGTTATGAAG CTGGTCGAGA TCGTCCGGAC GGTGGTCACC
TCGGCGGAGG TGGTCGCCGA CGTGGAAGGG CTCTGCAAGC GGCTGGGCAA GGTCGATGTG
ACGATCAATG ACCGCGCCGG CTTTATCGCC AACGCCCTGC TCTTCGGCTA CCTCAACCAT
GCGGTCAGCA TGGTCGAGGC GCGGTACGCC AGCCGGGAGG ACATCGACGC GGCGATGAAA
CTCGGCTGCG GTCTGCCGAT GGGCCCGTTG GCGCTGATGG ACCTGATCGG GCTGGACACC
GCGTACGAGA TTCTGGACAC GATGTACCGG CGGGGTGGTC GGGACCGTCG GCATGCTCCG
GTGCCGCTGA TCAAGCAGAT GGTTACCGCC GGGCTGCTCG GGCGGAAGTC GGGGCGCGGC
TTCTACACCT ACGAGCGGCC GGGTTCGCCG GTGGTCGTAC CGGACGAGCA GACGCCAGCG
AGCGCGGAGT CGACCCTGGG CGCCGGCGTT CGGGGCATCA CGAAGGTCGG CGTGGTCGGT
TCCGGAACGA TGGCGACCGG GATCATCGAA GTGTTCGCCA AGGCCGGCTA CGAGGTGGTC
TCGGTGACCC GGGGGGCGGA GAAGTCCGCC AAGCTCTTCG AGGCGGTGAA GACCTCACTC
AACAAGGGAG TGGTGCGGGG CAAGCTCGGC GAGGCCGATC GGGACGCCGC GCTGGGCCGG
ATCACGTGGT CCGCGACCTT GGAGCACCTC ACCGACGTGG ATCTGGTGGT CGAGGCGGTC
ATCGAGGAAC TGAGTGTCAA GAAGGCGTTG TTCGCCAGCC TCGACGAGAT CTGCAAGCCG
GGCGTCGTTC TCGCCACCAC CACCTCGTCG CTGCCGGTGA TCGACGTGGC GATGGCCACT
CAACGTCCGG CGGACGTGGT GGGCCTACAC TTCTTCAACC CGGCACCGGT CATGCCGCTG
GTGGAGATCG TGCAGACCAT CCGCACGTCG GCGGAGACCA CCGCCACCGC GAGGGCAGTC
TGCGCGGACC TGGGCAAGAC GGGTGTGGTC TGTGGAGACC GCTCCGGGTT CATCGTGAAC
GCGCTGCTCT TTCCGTACCT CAACGACGCG GTCAAGATGC TGGAGGCGAG CTACTCGACC
GCCGATGACA TCGACCACGC GATGAAGCTC GGTTGCGGGT ACCCGATGGG TCCGTTCGAT
CTGCTCGACG TGGTCGGCCT GGACGTGTCC CTGGCTATCC AGCGGGAGCT CTACCTGGAG
CTGCGCGAGC CGGGCTTCGC CCCCGCTCCG CTGCTGGAGC ACCTGGTCAC CGCCGGCTAT
CTGGGCCGGA AGTCTGGCCG TGGCTTCCGT GACCACACCC GCCGCTGA
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| Protein sequence | MREFASVGVV GLGTMGTGIV EVFARNGIDV VAVEVAEPAL ERGRATLTGS TDRAVAKGKL
AAADRDALLA RVDWQVGLDA LHSVDLVIEA VPEHLDLKQR IFAELDRVCK PEAVLATNTS
SLSVTEISVA TTRPNQVLGI HFFNPAPVMK LVEIVRTVVT SAEVVADVEG LCKRLGKVDV
TINDRAGFIA NALLFGYLNH AVSMVEARYA SREDIDAAMK LGCGLPMGPL ALMDLIGLDT
AYEILDTMYR RGGRDRRHAP VPLIKQMVTA GLLGRKSGRG FYTYERPGSP VVVPDEQTPA
SAESTLGAGV RGITKVGVVG SGTMATGIIE VFAKAGYEVV SVTRGAEKSA KLFEAVKTSL
NKGVVRGKLG EADRDAALGR ITWSATLEHL TDVDLVVEAV IEELSVKKAL FASLDEICKP
GVVLATTTSS LPVIDVAMAT QRPADVVGLH FFNPAPVMPL VEIVQTIRTS AETTATARAV
CADLGKTGVV CGDRSGFIVN ALLFPYLNDA VKMLEASYST ADDIDHAMKL GCGYPMGPFD
LLDVVGLDVS LAIQRELYLE LREPGFAPAP LLEHLVTAGY LGRKSGRGFR DHTRR
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