Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3986 |
Symbol | |
ID | 5706661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4529532 |
End bp | 4534589 |
Gene Length | 5058 bp |
Protein Length | 1685 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641273411 |
Product | NAD-glutamate dehydrogenase |
Protein accession | YP_001538767 |
Protein GI | 159039514 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000244751 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACCGGC GTCCGGCTAC CAAACCGGGA CCCGACCTCC GGCAGGTTGA TACCGGCCGG GACGACAACT TCGATTCGGC GACCGATTCC GACGGGTTCG GCGACGTCGA GACTGGTGTG ACCGGCCTGA CCGGTTCGAG CATCGACTCG ATCTATGACC TGGGCCTGCC CGCCAACGCG TTGGGCGAGG ACGCCGAGGA CTCGGACCTC GACGAGCCGG TACCCAACGC GGAACGCCTG GTGGCGCAGG CAATCACCCT CGCCGGCGAC GACCACGACT CGGCGGCGTT GGTCAGCCGC TACTGGCGGT TCGCGCCAGA CGAGGAGCTG ATCGGATTCA CCGCCGAGGA GATGCTCGAT TCCGTACGCT CCCATCGGGA GTTGGCCGAG CAGCGGGTAC CGGGCGAGTT GAAACTGCGT ATCCACGAGC CGGATGCCGA CCAGCACCAC ACGGTGGTCG AGATCGTCAC CGACGACATG CCGTTCCTGG TGGACTCGGT CACCGCCCTG CTCAATTCGC ACCACCTGGA TGTCCACCTG CTGGTGCATC CGCTGTTGGT GATCCGGCGC GAGCCACTCG GCCGGTTGGT CGAGGTGGCG GCGGAGATGG AGCCCGACGA TGTGGCCGCA GGCAGCCTCA TCGAGAGCTG GATGCGGATC GAGATCGACC CGGTTCGGGA CGCCGAGGAC CGGGACAATC TGCGCCGTGA GCTGCAACGA GTGCTCACCG ACGTGCGGGA GGCCGTCGAG GACTGGCCCA AGATGCGCCA GCGGGCCCTG GCGCTGGCCG ACGAGCTGGC CGCCGCCCGG AACAGCGCCA GCCGGCCACC CGTGCCGGAG AAGGACATCA CCGACTCGGT CGAGCTGTTG CGTTGGCTCG CCCACGACCA CTTCACCTTC CTTGGCTACC GGGAGTACCG CCTGGTGGAC GCGGCGGGGG AATCGGGCGG CAAGGCGTTG CGGGCCGTGC TCGGCACCGG CCTCGGGATT CTGCGCTCGG ACTCCACCGA GTCCCGGAGG CTCTCGTCGA TGACTCCGGA GGCGAACGAG CGGGTCACCG AGAAGCGCCT GCTGGTCATC ACCAAGGCGA ACTCGCGAGC CACCGTGCAC CGGTCCGCGT ACCTGGACTA CATCGGTTTC AAGGTGTTCG ACGAGGCCGG AGAGGTGGTC GGGGAGCGTC GGTTCATTGG CCTGTTCGCC ACCGCCGCGT ACCGCACCAG TGTGCGGGAA CTGCCGGTGG TGCGGCGCAA GGTGGCGGAG GTGGTCGATC GGTCCGGCCT GAGCCTGCGC AGCCACTCCG GCAAGGACCT GCTCCAGATC CTGGAGACCT ATCCGAGGGA CGAGCTGTTC CAGATCAAGA CCGATGACCT GTACCACGCG GTAGTCGGTG TGCTGCGCAT GGCCGGCCGT CGTCAGCTGC GGGTGTTCCT GCGCCGGGAC GCGTACGGAC GGTTCATCTC CTGCCTGATC TACCTACCGC GGGACCGGTT CACCACCCAG AACCGGTTGC GGATGCAGGA CATCCTGCTG CGCGAGCTGA ACGGTGTCGG GGTCGACTAC ACCACCCGGG TCACCGAGTC GATGTTGGCC CGAGTGCACT TCATCGTGCG CACCGACCCG ACCAAGCCGC CGGGGGACAT CGACGCTGAC CTGCTCGCCG AGGAACTGGC CGATGCCACC CGCCTCTGGG ACGACGACTA CCGGCTGGTG CTGGAGCGCA AGCTCGGCGA TGAGCAGGCC AAGCACCTGT TTGCCCGGTA CGCCGATGCC TTCCCGGAGG GCTACAAGGA CGGGCACACG CCGTATGAGG CGATGAAGGA CCTGGCGAAG CTGGAACTGC TGGAGGAGTC CGGTCAGCTG GAGATGCACC TGTTTCGTAA GCAGTTGGCC CCGCGGGCGG CCAACCGCGG GGCAGGCGTT GACGAGCCGA TGGACGTCCG GTTCAAGGTC TACCGGTACG GCGAGCCGAT GATGCTGTCG GCGGTGCTGC CGGTACTGCA CTCGCTCGGT GTGAAGGCGG TTGACGAGCA CCCGTACGAG GTGGAGCGCG TCGACGGGCG GATCTGGCTC TACGACTTCG GCCTGCAGTT GCCCGAGGGG CACCAGGAGC TGACCGAGGT GCGCCCGCAC GTGGAGAACG CCTTCGCGGC AGCCTGGCGG GGCGAGGCCG AGGTGGACGG CTTCAACGAG CTGGTCCTGC GTGGCGGGCT CACCTGGCGG CAGGTGGTGG TGTTGCGGGC GTACGCCAAG TACCTGCGTC AGGCCGGCAC GATCTTCTCC CAGGACTACA TGGAGTCGAC GTTCATCGCC TATCCGCGGA TCGCGGCCCT GCTGGTGCGG CTCTTCGAGG CACGGTTCGC GCCGGGATCG ACGAGTCCCG AACAGCGCCA GCAGCAGAGC AGGGAACTGG TCGCCGAGTT GTGCGCCGCG CTCGACGACG TGGCCAGCCT CGACCAGGAC CGGATCCTCC GGTCGTATCT GACCCTGATC CAGGCCACCC TGCGGACCAG CTTCTACCAG AAGCGTGCCG ACGGGCGGCC GAAGTCGTAC GTCGCCCTGA AGCTGGACCC GCAGGCGATC CCTGACCTGC CGGCGCCGCG GCCCCGGTTC GAGATCTTCG TGTACTCGCC CCGGTTCGAG GGTGTGCACC TGAGATTCGG GCCGGTGGCC CGGGGAGGGT TGCGCTGGTC CGACCGGCGG GAGGACTTCC GTACCGAGGT GCTCGGCCTG GTAAAGGCGC AGATGGTCAA GAACGCGGTG ATCGTCCCGG TTGGTGCCAA GGGTGGCTTC GTGCTCAAGC AGAAGCCGGG CGACCGGGAC GAGGCGGTGG TCTGCTACAA GGAGTTCATT TCCGCGTTGC TGGACGTCAC CGACAACATC GTCAGCGGCG AGATCGTGCC GCCGCCGGAC GTGGTCCGCC ACGACGGGGA CGACCCGTAC ATGGTCGTCG CGGCGGACAA GGGCACCGCC ACCTTCTCCG ACATCGCCAA CGAGATCTCC ACCGCCCACA ACTTCTGGCT GGGCGACGCG TTCGCCTCCG GCGGATCGGC AGGTTACGAC CACAAGAAGA TGGGCATCAC CGCCCGCGGC GCCTGGGAAT CGGTGAAACG GCACTTCCGC GAGCTGGGGC ACGACACGCA GACCCAGGAA TTCACGGTCG TCGGCGTCGG CGACATGTCC GGTGACGTTT TCGGTAACGG GATGCTGCTG TCACGGCACA TCCTGCTGGT GGCCGCATTT GACCACCGGC ACATCTTCCT CGACCCGAAT CCGGACGCCG CCGCTTCATG GTCGGAGCGG AAGCGGCTGT TCGATCTGTC CCGGTCGTCG TGGGAGGACT ACAACGCGGA GCTGATCTCC GCTGGCGGTG GTGTGTTCCT GCGTACCGCG AAGTCGGTGC CGATCTCACC CCAGGTGCGC GCGGCACTCG GTATCGAGGA GGGCGTGTCG CAGCTCAGCC CACAGGAGCT GATGAAGGCG ATCCTCACCG CGTCGGTCGA CCTGTTCTGG AACGGTGGTA TCGGCACCTA CATCAAGGCG TCGAGTCAGA CCAACGTCGA GGTGGGGGAC AAGTCCAACG ACGCGATTCG GGTCGACGGC AAGGATCTGC GCTGTCGAGT GGTCGGCGAG GGGGGCAACC TGGGCTGCAC CCAGCTCGGC CGGATCGAGT ACGCCGAGGC GGGAGGCCGG GTCTACACCG ACTTCATCGA CAACGCCGCC GGAGTGGACT GCTCGGACCA CGAGGTGAAT ATCAAGATCC TGCTGAACAC GGCGGTCGCC GACGGGGAAC TGACCGTCGG TGAGCGGGAC GAGCTGCTCG CCGAGATGAC CGACGAGGTC GCCGAGCTGG TGCTGCGGGA CAACTACGAC CAGGCGCGGG CGATCAGTAA CGCGCAGGCC CAAGCGCCGT CGCTGCTGCC GGTGCACCGA CGGATGATCG TTGATCTGGA ACGCTCCGGT GCCCTGGACC GGGCCTTGGA GGCGCTGCCG CCGGACGAGG AACTGGCCGT CCGGATGGAG TCCGGGATGA CCGCGCCCGA GTTTGCGGTG CTGCTCGCGT ACGTCAAGAT CGTGCTCGAG AAGGAGATCC TGGCAGAAGG TCTGGCTGAC GAGGAGTGGA CGACCGAACT GCTGGTCAAC TACTTCCCGA CGCCGATGCG GGAGCGGTTC GCCGACCGGA TGTCCCGACA CCGGCTGCGC CGGGACATCG TCACCACCAT GTTGGTCAAC GAGGCGATCA ACCGGGGCGG CATCTCGTTC GTCTACCGAG TGGTCGAAGA GACCGGGGCG ACCGGCGCCG ACGTTCTGCG GGCGTACGTA GTGGTGCGCG AGGTGTTCGG GCTGCGCAAG GTCTGGAACG CCGTGGAGGA ACTGGACAAC CGGGTTGCCC CCGAGTTGCA GACCGGTGTC TACCTGGATG TCCGGCGCCT GCTGGACCGG GCGGTGCGGT GGTTGGTGAC GAACCGCCGC TCCCCGATCG ACGTGCCGGC GGAGATCGCA CGGCTTCGTG ACGGGGTGGC CCACCTCCTA CCGGGGATGG AAACGCTCTT CTACGGCACC GAGCGGGAGG CCATCGCGGC GCACATCGAG GCGATGGTCG CCAACGGGCT ACCGCGGGGC CTGGCGCAAC AGGCGGTCCG ACTGATGTAC AGCTTCGGCC TGCTCGATGT GGTCGAGACA GCGGCGAGCA GTGGACGTGA CGTGTCCGAG GTCGCATCGG TCTACTTCGT CCTGTCGGAC CGGTTCCGGG TGGACTCGCT GCTGTCGAAG ATCTCCCTGC TCCCGCGGGA AGACCGGTGG CAGACGCTGG CCCGAATGGC GCTGCGCTAC GACCTGTACG CCGCACTCGC TGCGCTGACC ACCGAGGTAC TGGAGGCCAC TCCGGTCAGC CTGCCGCCGG TGGAGCGGGT ACAGCAGTGG GAGCAGTCGA ACGCCACCTC GATCCACCGT GCGCAGCGGG CGATGGGCGA GTTCGACGAG TCCCGGGCCG ACCTCGCCGC TCTGTCGGTG CTACTGCGCC AGATCCGGAC GCTGGTCCGT ACTTCGGCGG CGTCCTGA
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Protein sequence | MDRRPATKPG PDLRQVDTGR DDNFDSATDS DGFGDVETGV TGLTGSSIDS IYDLGLPANA LGEDAEDSDL DEPVPNAERL VAQAITLAGD DHDSAALVSR YWRFAPDEEL IGFTAEEMLD SVRSHRELAE QRVPGELKLR IHEPDADQHH TVVEIVTDDM PFLVDSVTAL LNSHHLDVHL LVHPLLVIRR EPLGRLVEVA AEMEPDDVAA GSLIESWMRI EIDPVRDAED RDNLRRELQR VLTDVREAVE DWPKMRQRAL ALADELAAAR NSASRPPVPE KDITDSVELL RWLAHDHFTF LGYREYRLVD AAGESGGKAL RAVLGTGLGI LRSDSTESRR LSSMTPEANE RVTEKRLLVI TKANSRATVH RSAYLDYIGF KVFDEAGEVV GERRFIGLFA TAAYRTSVRE LPVVRRKVAE VVDRSGLSLR SHSGKDLLQI LETYPRDELF QIKTDDLYHA VVGVLRMAGR RQLRVFLRRD AYGRFISCLI YLPRDRFTTQ NRLRMQDILL RELNGVGVDY TTRVTESMLA RVHFIVRTDP TKPPGDIDAD LLAEELADAT RLWDDDYRLV LERKLGDEQA KHLFARYADA FPEGYKDGHT PYEAMKDLAK LELLEESGQL EMHLFRKQLA PRAANRGAGV DEPMDVRFKV YRYGEPMMLS AVLPVLHSLG VKAVDEHPYE VERVDGRIWL YDFGLQLPEG HQELTEVRPH VENAFAAAWR GEAEVDGFNE LVLRGGLTWR QVVVLRAYAK YLRQAGTIFS QDYMESTFIA YPRIAALLVR LFEARFAPGS TSPEQRQQQS RELVAELCAA LDDVASLDQD RILRSYLTLI QATLRTSFYQ KRADGRPKSY VALKLDPQAI PDLPAPRPRF EIFVYSPRFE GVHLRFGPVA RGGLRWSDRR EDFRTEVLGL VKAQMVKNAV IVPVGAKGGF VLKQKPGDRD EAVVCYKEFI SALLDVTDNI VSGEIVPPPD VVRHDGDDPY MVVAADKGTA TFSDIANEIS TAHNFWLGDA FASGGSAGYD HKKMGITARG AWESVKRHFR ELGHDTQTQE FTVVGVGDMS GDVFGNGMLL SRHILLVAAF DHRHIFLDPN PDAAASWSER KRLFDLSRSS WEDYNAELIS AGGGVFLRTA KSVPISPQVR AALGIEEGVS QLSPQELMKA ILTASVDLFW NGGIGTYIKA SSQTNVEVGD KSNDAIRVDG KDLRCRVVGE GGNLGCTQLG RIEYAEAGGR VYTDFIDNAA GVDCSDHEVN IKILLNTAVA DGELTVGERD ELLAEMTDEV AELVLRDNYD QARAISNAQA QAPSLLPVHR RMIVDLERSG ALDRALEALP PDEELAVRME SGMTAPEFAV LLAYVKIVLE KEILAEGLAD EEWTTELLVN YFPTPMRERF ADRMSRHRLR RDIVTTMLVN EAINRGGISF VYRVVEETGA TGADVLRAYV VVREVFGLRK VWNAVEELDN RVAPELQTGV YLDVRRLLDR AVRWLVTNRR SPIDVPAEIA RLRDGVAHLL PGMETLFYGT EREAIAAHIE AMVANGLPRG LAQQAVRLMY SFGLLDVVET AASSGRDVSE VASVYFVLSD RFRVDSLLSK ISLLPREDRW QTLARMALRY DLYAALAALT TEVLEATPVS LPPVERVQQW EQSNATSIHR AQRAMGEFDE SRADLAALSV LLRQIRTLVR TSAAS
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