| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3939 |
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| Symbol | |
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| ID | 5703676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4482519 |
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| End bp | 4483208 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641273364 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001538720 |
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| Protein GI | 159039467 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.203044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.164365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGC GTACTCCCAT CGGGGTGGTC ATCGTCGATG ACCACCCGGT GGTCATCGAC
GGGGTACGCG CCTGGCTCGC CAGCGAACCA CAGCTCACGG TGCTCGCCAC CGGCGACGAC
CCGGACGAGG TGCTGCGGGC CGCGCCGCAG GCCGATGTCA TCCTGCTCGA CCTGCGTCTG
CACGGCCGGA TCGTGCTGGA CAAGCTCACC GCGCTCTGCA CCGCCGGGCG CCGGGTGGTG
GTCTACTCCG AGCTCACCGA CCCGGCGACG CTACTGGCTG CGCTGGACAC TGGAGCGGTG
GCGTTCCTCG CCAAGCACGA AGGGCGGGAC CACTGCGTGG CGACCGTTCT GGCGGCGGCC
AGCGATCGGG CGTATGTACC GCCGACGCTG GCCGGTGCGC TCGTCGGCGA CCCACGGCCG
GACCGACCCG TGCTGTCGGA CAAGGAGCGG GAGGCGTTGC TGCTGTGGTT CCAGTCGATG
TCGAAGGCAT CGGTGGCTCG GCGGATGCAA ATCAGCGAAC ACACCGTCAA GCAGTACGTC
GACCGGGCCC GGATCAAGTA CACCCGGGCC GGACGGCCGG CCGCGACGAA GGCGACCCTC
CTCGCCCGGG CCATCGAGGA CGGCCTCATT CGGCCGGAGG AGATCGGCAC CTACCAATCT
CAGGCGTCGT ACGAACGGCC GACCCCCTAA
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| Protein sequence | MTARTPIGVV IVDDHPVVID GVRAWLASEP QLTVLATGDD PDEVLRAAPQ ADVILLDLRL
HGRIVLDKLT ALCTAGRRVV VYSELTDPAT LLAALDTGAV AFLAKHEGRD HCVATVLAAA
SDRAYVPPTL AGALVGDPRP DRPVLSDKER EALLLWFQSM SKASVARRMQ ISEHTVKQYV
DRARIKYTRA GRPAATKATL LARAIEDGLI RPEEIGTYQS QASYERPTP
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