Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3868 |
Symbol | ndk |
ID | 5705899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4404030 |
End bp | 4404455 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641273289 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_001538651 |
Protein GI | 159039398 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.211598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000564346 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCAGCA GTAGCCCGGA CGAACGCACG CTCGTACTGA TCAAGCCCGA CGCGGTCCGT CGCGGGTTGG TCGGCGAGAT CATCTCCCGC TTCGAGCGTA AGGGGTTGCG GCTCGATGCG ATGGTGCAGC GGACGCTGGA CGAGAGCTTT GCCGACCAGC ACTACGCCGA GCACGTCGAC AAGCCGTTCT ATCCGCCGCT GAAGGCATTC ATGACCGGTG GCCCGCTGGT CGCGCTCGTA CTCTCGGGCG ACCAGGTCAT CGAGGTGGTA CGCGGCATGA TCGGCGTCAC CGACGGCCGG CGGGCCGCGG CCGGCACCAT CAGGGGTGAC CTGTCGCTGT CGAACCGGGA GAACCTCGTG CACGCCTCCG ATTCCGTGGA CAGCGCGAAG CGCGAGATCG GGCTCTGGTT TCCTGAGCTG CTCTGA
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Protein sequence | MSSSSPDERT LVLIKPDAVR RGLVGEIISR FERKGLRLDA MVQRTLDESF ADQHYAEHVD KPFYPPLKAF MTGGPLVALV LSGDQVIEVV RGMIGVTDGR RAAAGTIRGD LSLSNRENLV HASDSVDSAK REIGLWFPEL L
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