Gene Sare_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3868 
Symbolndk 
ID5705899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4404030 
End bp4404455 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID641273289 
Productnucleoside diphosphate kinase 
Protein accessionYP_001538651 
Protein GI159039398 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.211598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000564346 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCAGCA GTAGCCCGGA CGAACGCACG CTCGTACTGA TCAAGCCCGA CGCGGTCCGT 
CGCGGGTTGG TCGGCGAGAT CATCTCCCGC TTCGAGCGTA AGGGGTTGCG GCTCGATGCG
ATGGTGCAGC GGACGCTGGA CGAGAGCTTT GCCGACCAGC ACTACGCCGA GCACGTCGAC
AAGCCGTTCT ATCCGCCGCT GAAGGCATTC ATGACCGGTG GCCCGCTGGT CGCGCTCGTA
CTCTCGGGCG ACCAGGTCAT CGAGGTGGTA CGCGGCATGA TCGGCGTCAC CGACGGCCGG
CGGGCCGCGG CCGGCACCAT CAGGGGTGAC CTGTCGCTGT CGAACCGGGA GAACCTCGTG
CACGCCTCCG ATTCCGTGGA CAGCGCGAAG CGCGAGATCG GGCTCTGGTT TCCTGAGCTG
CTCTGA
 
Protein sequence
MSSSSPDERT LVLIKPDAVR RGLVGEIISR FERKGLRLDA MVQRTLDESF ADQHYAEHVD 
KPFYPPLKAF MTGGPLVALV LSGDQVIEVV RGMIGVTDGR RAAAGTIRGD LSLSNRENLV
HASDSVDSAK REIGLWFPEL L