Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3686 |
Symbol | |
ID | 5705294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4246094 |
End bp | 4246555 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641273106 |
Product | PilT domain-containing protein |
Protein accession | YP_001538470 |
Protein GI | 159039217 |
COG category | [R] General function prediction only |
COG ID | [COG5573] Predicted nucleic-acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGTC CTGACCGTCC TTCCTCGGTT TACCTCGACT CGGACACCCT CATCTACGCC GTCACTGAGA AGGACGGCTG TGAGCCGGTC CTTGCGGTGC TGCGCCTAGC GGAAGCCAGG AAGTTGGAGG TCGTGATCTC CGACTTGTCG TACGTCGAGG TGAGGGGCTG GGGCAAGAGC GATCCCTACC CACCTGAACT CGACCGCAGG TGCCGAGATG CCCTAGACAG CACCAACTTG GTGCGGGTCG AGTTTTCCCG GCGGATCGCC CTACGGGCAC GGGAGTATGC CTACGTGCAC CACCTGGGCA ACTACGACGC AATCCATCTT GCATCGGCTG CGGAGGCCGG CGTCAACGTG ATGATGACCT GGGATAAAGG TCTACTGCGG GCGAGGTGTG TTGACGGCAT CTGGATCGAG GAGCCGTACG AGATCGGCGA GCCGACCCTG TTTCCTGCCT GA
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Protein sequence | MARPDRPSSV YLDSDTLIYA VTEKDGCEPV LAVLRLAEAR KLEVVISDLS YVEVRGWGKS DPYPPELDRR CRDALDSTNL VRVEFSRRIA LRAREYAYVH HLGNYDAIHL ASAAEAGVNV MMTWDKGLLR ARCVDGIWIE EPYEIGEPTL FPA
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