Gene Sare_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3686 
Symbol 
ID5705294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4246094 
End bp4246555 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID641273106 
ProductPilT domain-containing protein 
Protein accessionYP_001538470 
Protein GI159039217 
COG category[R] General function prediction only 
COG ID[COG5573] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGTC CTGACCGTCC TTCCTCGGTT TACCTCGACT CGGACACCCT CATCTACGCC 
GTCACTGAGA AGGACGGCTG TGAGCCGGTC CTTGCGGTGC TGCGCCTAGC GGAAGCCAGG
AAGTTGGAGG TCGTGATCTC CGACTTGTCG TACGTCGAGG TGAGGGGCTG GGGCAAGAGC
GATCCCTACC CACCTGAACT CGACCGCAGG TGCCGAGATG CCCTAGACAG CACCAACTTG
GTGCGGGTCG AGTTTTCCCG GCGGATCGCC CTACGGGCAC GGGAGTATGC CTACGTGCAC
CACCTGGGCA ACTACGACGC AATCCATCTT GCATCGGCTG CGGAGGCCGG CGTCAACGTG
ATGATGACCT GGGATAAAGG TCTACTGCGG GCGAGGTGTG TTGACGGCAT CTGGATCGAG
GAGCCGTACG AGATCGGCGA GCCGACCCTG TTTCCTGCCT GA
 
Protein sequence
MARPDRPSSV YLDSDTLIYA VTEKDGCEPV LAVLRLAEAR KLEVVISDLS YVEVRGWGKS 
DPYPPELDRR CRDALDSTNL VRVEFSRRIA LRAREYAYVH HLGNYDAIHL ASAAEAGVNV
MMTWDKGLLR ARCVDGIWIE EPYEIGEPTL FPA