| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3623 |
|---|
| Symbol | |
|---|
| ID | 5708170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 4179610 |
|---|
| End bp | 4180836 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641273048 |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_001538412 |
|---|
| Protein GI | 159039159 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000605474 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA CCGACGTCGT CGTCACCGGT CTCGGCGCGA CCACCCCGCT GGGCGGGGAC
GTCGCGTCGA CCTGGGACGC CATGCTCAAC GGCCACTCCG GGGTGAGCGC CCTCACCTCG
GAGTGGGCCG AGCAGCTGCC GGTCCGGATC GCCGCCCAAC TCGCGGTCGA CCCGGCCAGT
CTGCTGGACC GGGTCAAGTT GCGCCGGCTG GACCGCTCCG AAGCGATCGC CATCATCGCC
GCACACCAGG CATGGGCGGA CGCTGGCCTG GCCGATTCCG GATTGGATCC GGAGCGGCTC
GGCGTCAGCG TCGGCTCGGG CATCGGCGGC GCGCTGACCC TGCTCGCCCA GGACGACATC
CTTGAGTCGT CCGGCCCGCG GCGGGTCTCC CCGCACACGA TCCCGATGCT GATGCCGAAC
GGCCCCGCCG CCTGGGTCGG TCTGGAACTG GGCGCCCGCG CGGGCGTGCA CTGTGTGGCC
AGCGCTTGTG CCACCGGCGC GGAGGCGATC ACCCTCGGCC TGGACATGAT CCGCGCTGGG
CGGGCCGATG TGGTGGTGGC CGGCGGCACC GAGGCGGTCA TCCACCCGCT GCCGATCGCC
GGCTTCTCCT CGATGCGGGC CATGTCCACC CGCAACGACG AGCCGGAGCA GGCGTCTCGT
CCCTGGGACA AGGGCCGAGA CGGCTTCGTC CTCGGTGAGG GCGCCGGGAC GCTCGTGCTG
GAACGGGCCG ACCACGCCGC GGCCCGGGGC GCCCGGGTGT ACGCGCGGAT CGCCGGCGCC
GGAATAACCT CCGACGGCTA CGACATCGTC CAGCCACACC CGGAGGGTGT CGGCGCGGTC
CGGGCCATCG CGAAGGCGAT CGCCGACGCG GACATCGACC GGGGCGACAT CGTGCACGTC
AACGCCCACG CCACGTCGAC CCCGGTCGGC GACATGGCCG AGATCAAGGC ACTGCGCCAG
GCGCTGGGCG ACCATCCCGT GCTGACCGCG ACGAAGTCGA TGTCCGGGCA CCTGCTCGGC
GCGGCTGGCG CGCTGGAGTC GATCGCCACG ATCCTGGCCA TCCGCGATGG CGTGGTACCG
CCCACGATCA ACCTGGACGA CCCGGACGAC GGTCTCGACC TGGATGTGGC CGCCAACAAG
GCACGCCACC TGGAGATCCC CGCCGCGCTG AACAACTCCT TCGGCTTCGG CGGGCATAAC
GTGGCTCTCG TCTTCACGCG GGCCTGA
|
|---|
| Protein sequence | MARTDVVVTG LGATTPLGGD VASTWDAMLN GHSGVSALTS EWAEQLPVRI AAQLAVDPAS
LLDRVKLRRL DRSEAIAIIA AHQAWADAGL ADSGLDPERL GVSVGSGIGG ALTLLAQDDI
LESSGPRRVS PHTIPMLMPN GPAAWVGLEL GARAGVHCVA SACATGAEAI TLGLDMIRAG
RADVVVAGGT EAVIHPLPIA GFSSMRAMST RNDEPEQASR PWDKGRDGFV LGEGAGTLVL
ERADHAAARG ARVYARIAGA GITSDGYDIV QPHPEGVGAV RAIAKAIADA DIDRGDIVHV
NAHATSTPVG DMAEIKALRQ ALGDHPVLTA TKSMSGHLLG AAGALESIAT ILAIRDGVVP
PTINLDDPDD GLDLDVAANK ARHLEIPAAL NNSFGFGGHN VALVFTRA
|
|---|
| |