Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2809 |
Symbol | |
ID | 5707001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3189692 |
End bp | 3190795 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272265 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001537635 |
Protein GI | 159038382 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000259452 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGATTCT CCCCAAGCGA GAGCCATCGC GACTTGGCCA CGCTGACCAG ACAGATCCTC ACTGACCGGG TGACCAACGA CTGGCTGCGC GAGATCGAGG CCAAGAACAT CTGCGTCGAC CGGCCGCTGT GGCAGGAACT GGCCAAGGCG GGAGTACTCG CCGCCGCACT GCCGCACCGG GCGGGAGGCG ACGGGCTCGG TCTGCTGGAG CAGTGCGGTG TCCTGGTCGA GGTGGGTCGG GCCGTCGCAC CCGTGCCCTA CCTGTCCGGC ATCGTCACCG CCGTGGCCGG GCTGGCCACC TTCGGAAGCG ACGCGCAGCT GGCGCGCTGG GTCGCGCCCG CCCTGGAGGG GACGGTGATC CTCACTGCTG CACTCGCCGT CGACGGTGAC GTACACGCAG AACGCGTCGC CGACCGTTGG GTGCTGACCG GGGCGAGAAG TGCCGTACCG GCCGCGCCGG ACGCCGATCT GGTGCTGGTG CCGGCCGAGG TCGACGGCAG GACCGCAGTG TTCCTGGTCT GCTCCGATGA TCCCGGGGTG ACCGTGGAGC CGCAGGAGAT CGCCGGCGGA GAAGGGGCTG GCTGGCTCGA CCTGGACAGG GTGGCCCTGG CCGACGACCG GCTGCTCGGC AGCGTCGCGG ACGGCAGGGC CATCGCAGCG TGGCTCACGG CCCGGGCCAC CATCGGGTCG TGTGCCGTCC AGCTCGGGGT GACCGAACGG GCTCTGGAGT TGACCGCCGG GTACACCTGC GACCGGATCC AGTTCGGACG TCCGATCGGC ACCTTCCAAG CGGTGACACA GCGCCTGGCC GACGCGTACG TCGACGTCGA GGCGATCCGC CTCACGCTGT GGCAGGCGGC CTGGCGTCTC GCCGAGGGGC TCCCCTGTCC GACCGAGGTG GCGACGGCGA AGTTCTGGGC CGCCGACGCC GGACACCGGG TGGCACATAC CGCCGTCCAT CTCCACGGTG GTGTCGGAAT CGACATCGAT CACCGCCTGC ACCGCTACTT CGTCGCCGCC AAGCACCACG AGTTCCGCCT GGGCGGCGCG ACCGCCCAGC TACGGGCGAT CGGAGCCGCT CTCACCTCGG TTGATCCAGA GTGA
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Protein sequence | MRFSPSESHR DLATLTRQIL TDRVTNDWLR EIEAKNICVD RPLWQELAKA GVLAAALPHR AGGDGLGLLE QCGVLVEVGR AVAPVPYLSG IVTAVAGLAT FGSDAQLARW VAPALEGTVI LTAALAVDGD VHAERVADRW VLTGARSAVP AAPDADLVLV PAEVDGRTAV FLVCSDDPGV TVEPQEIAGG EGAGWLDLDR VALADDRLLG SVADGRAIAA WLTARATIGS CAVQLGVTER ALELTAGYTC DRIQFGRPIG TFQAVTQRLA DAYVDVEAIR LTLWQAAWRL AEGLPCPTEV ATAKFWAADA GHRVAHTAVH LHGGVGIDID HRLHRYFVAA KHHEFRLGGA TAQLRAIGAA LTSVDPE
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