Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2781 |
Symbol | |
ID | 5706173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3162619 |
End bp | 3164277 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641272237 |
Product | hypothetical protein |
Protein accession | YP_001537607 |
Protein GI | 159038354 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3559] Putative exporter of polyketide antibiotics |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.998834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000210195 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCACCC TGACGCTCGA CCGCCCGGTA CGCGTTGCGC CCAGCCAGGC CGGCAGCGCG GTCACCGGGA CCGGCACCCT ACTGCGGTTC ATGCTGCGCC GCGACCGGAT CCGCTTCCCG GCGTGGACCC TCGGCCTGGC CCTGTTGATG ACGTACTTCG CCACCGCGCT GGAGACCTTC GTCGAGAGTC CGGCGGACCT GGAGGGGCTG ACCGCGTTCT CCGGCAGCCC GGCCGGTGCG CTCTTCGGCG GCCCGGGATT CGGCTTCGAC GAGCTGACCG TCGAGCGCTT CCTCGCCGGC CAGTACGGCC TCTACGTGGC GATCGGCGCC GGCCTGATGG GGTTGCTGAC AGTAGTGCGG CACACCCGCG CCGAGGAGCG CTCCGGCCGG GCCGAGCTGG TCCGCGCCAA CGTGGTCGGC CGGCACGCCC AGCTCACCGC CGTCCTGGTG CTCGCCGCCA TGATGGCCGC GCTGGTCGCC CTGCTGATCG GCGGTCTGAT GGCCAGCCGC GGTTACGACG TCGGTGGGTC GGTACTGTTC GGTGCCTCCG TGGGCGCGGT GGGGTTGGTG TTCGCCGGTA TCGCGGCGGT CACCGTCCAA CTGTCGGAGT ATCCACGGGC CGCCTCCAGC ACAGCCGGTG CCCTGCTCGG AGCCGCGTTC GTCCTGCGCG GCCTGGGCGA CATGGCAGCG GCGCAGGGCA GCGGCGCCTC GTGGCTGTCG TGGTTGTCGC CGATCGGCTG GTCCCAGCAG ACCGCGCCGT ACGTGTTCGA CCGCTGGTGG CCACTGGCGA TCTCGTTGGC CTTCGCGGCG GTCAGCGCCG CGGCCGGCTA CGCGCTGTCA GCCCGTCGGG ACTTCGGTGC CGGGCTCGTG CCGCCCCGTC CCGGACCAGC CCGGGCGGCG GCCTGGCTGG ACGGGCCGCT CGCGCTCGCG TTCCGGATGC ATCGGGCCAG CCTGATCGGG TGGAGCGTGG GGCTGCTCAC GGCCGGCCTC GCCTACGGCT CGTTCACCCA GCCACTGCTC GACGGTTTCA CGGAGGCGCC CGAGGACATG GTCGCCATCA TGGGCGGCGC GGAGAACCTG CTGGACGGCT ACCTCGGCAC CATGGGCCTG ACCATGGCAC TCGCCGTCGG GGTCTACGCG GTGCTCGCCA TGCAGGCGCT GCGCGCCGAG GAGACCGAGG GACGGGCCGA GTCCGTCCTC GCGACGGCCG TGAGCCGCCC CGCCTGGATC GGCAGTCACC TCGCGGTGAC CGCGGTGGGC GTCCCGTGGC TGTTGCTGGT CGCCGGCCTG GGCATGGGCG TCGGGGCGGC GGTGAGCACC GGCGACGCCG GGTCCTTCGG TGGCCTGCTG CTCGGCCACG TGGCGCACAC CCCGGCGGTC TGGCTTCTCC TTGCCGTCGC CGCACTGCTC TACGCGGTGG TGCCGCGGGT GCTGCCGGCG ATCTGGGTGG TGCTCGGCTA CGGGCTGGTC GTCGGGTACT TCGCCCCGAT CCTGGAAATT CCCACCGGTG CGGTACGGCT GTCACCGTTC GCGCACGTCG GTGAACATCC GTTGGAGGAT GTCAGCGTGC TCGCGGTCGT CGTGTTGACC GTGCTCGCCG CAGTGATCGC CCAGGTGGCC AGGCTGGCGT TCCGGCGGGA CGTGGTCGGT CGAACCTGA
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Protein sequence | MATLTLDRPV RVAPSQAGSA VTGTGTLLRF MLRRDRIRFP AWTLGLALLM TYFATALETF VESPADLEGL TAFSGSPAGA LFGGPGFGFD ELTVERFLAG QYGLYVAIGA GLMGLLTVVR HTRAEERSGR AELVRANVVG RHAQLTAVLV LAAMMAALVA LLIGGLMASR GYDVGGSVLF GASVGAVGLV FAGIAAVTVQ LSEYPRAASS TAGALLGAAF VLRGLGDMAA AQGSGASWLS WLSPIGWSQQ TAPYVFDRWW PLAISLAFAA VSAAAGYALS ARRDFGAGLV PPRPGPARAA AWLDGPLALA FRMHRASLIG WSVGLLTAGL AYGSFTQPLL DGFTEAPEDM VAIMGGAENL LDGYLGTMGL TMALAVGVYA VLAMQALRAE ETEGRAESVL ATAVSRPAWI GSHLAVTAVG VPWLLLVAGL GMGVGAAVST GDAGSFGGLL LGHVAHTPAV WLLLAVAALL YAVVPRVLPA IWVVLGYGLV VGYFAPILEI PTGAVRLSPF AHVGEHPLED VSVLAVVVLT VLAAVIAQVA RLAFRRDVVG RT
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