| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2741 |
|---|
| Symbol | |
|---|
| ID | 5705724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3122308 |
|---|
| End bp | 3123339 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641272197 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001537567 |
|---|
| Protein GI | 159038314 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.100238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0112773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAG CCTTGCCCGC CCGTCGACTC TCCCGTCGTG GCCTGCTCGC CGCCGCCGGC
GGTGTCAGCC TGGCCGCCCT CCTCGCCGGC TGCGGCAGCG AGGACACCGA CACCCCCGCC
GCCAGTGCCA GCTCCGGCCC ATGGTCCTTC ACCGACGACC GAGGCGAGAA GCTGTCCGCC
GACACCCCTC CCACCCGAGT CGTCGCGTTC ACCGGTGTGG CCGCGGCGCT TGTCGACTTC
GGCGTCGACG AGCAGATCGT CGGCGTGTTC GGCGAGACCA CCCGCGCCGA TGGCAGCAAG
GACCCGCAGG CCGGGGACCT GAACGTGGAG AGCGTCGAGA TCCTGGGTAA CACCTGGGGC
GAGTTCAACC TGGAGAAGTA CGTCGGCCTG AGCCCCGAGC TGCTGGTCAC GCACATGTAC
GACCCCGACG CGCTCTGGTA CGTGCCGGAC GAGAGCAAGG ACAAGATCGT TCCACTCGCC
CCCGTCGCGG CGATCACCAC CGCCCGGGTG CCGATGACCA AACCCATCGA ACGGTACGCG
CAGCTCGCCG AGTCCCTCGG CGCGGACCTG TCCGCACCCG CCGTCACCGA CGCGAAGGCC
CGTTTCGAAG CCGCCGCCGA ATCGGTCCGT CACGCCGTCA AGGCCAACCC GGGCATCAAG
GTGATGGCCT GCTCCGGCAG CCCCGACCTG TTCTACGTGT CCAACCCGAA GGTCAGCACC
GACCTGATGT ACTTCGCCGA TTTGGGCGTC GACCTCGTGG TGCCCACGAA GCTGGAGGCG
GGCGACTACT TCGAGGCACT CAGCTGGGAG AACGCCGACA AGTTCCCGGC CGACCTGATC
CTGCTCGACA ACCGCAGCAC CGCGCTGCAG GCCGAGGACC TCGCCGCCAA GCCCACCTGG
GCACAGCTAC CGGCCGTGGC GGCCAACCAG GTCACCGCGT GGGACGCCGT GCCCCGCTTC
TCGTACGCCG GCGCCGCTCC GCTGCTGGAG GACCTGGCCA CCGCGATCAA GGGTGCGAAG
AAGGTCAGCT GA
|
|---|
| Protein sequence | MSQALPARRL SRRGLLAAAG GVSLAALLAG CGSEDTDTPA ASASSGPWSF TDDRGEKLSA
DTPPTRVVAF TGVAAALVDF GVDEQIVGVF GETTRADGSK DPQAGDLNVE SVEILGNTWG
EFNLEKYVGL SPELLVTHMY DPDALWYVPD ESKDKIVPLA PVAAITTARV PMTKPIERYA
QLAESLGADL SAPAVTDAKA RFEAAAESVR HAVKANPGIK VMACSGSPDL FYVSNPKVST
DLMYFADLGV DLVVPTKLEA GDYFEALSWE NADKFPADLI LLDNRSTALQ AEDLAAKPTW
AQLPAVAANQ VTAWDAVPRF SYAGAAPLLE DLATAIKGAK KVS
|
|---|
| |