Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2718 |
Symbol | |
ID | 5706777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3098276 |
End bp | 3099895 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641272176 |
Product | hypothetical protein |
Protein accession | YP_001537546 |
Protein GI | 159038293 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3559] Putative exporter of polyketide antibiotics |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00258596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGCAT TCACCGGCAC CGGCCGACTG GCCCGGCTCG TCCTGCGCCG TGACCGGATC AAGCTCGGGG TCTGGGTGCT CGGGACGCCG CTGCTCGGGG TCGCCCTCGC CAGCAGCGTC ACCGAGTTCT ATCCCGACGA GGCCACTCGC CTCGGCTACG CCGAGGCCGC GCTCACCAGC GTGGTGGCAC GCGCCTTCAA CGGCCCGATC TTCAGCGCCG ACCTGGGCTC GATCGTCGTC GTCGAGACCT ACCTGACGCT CGCCCTGCTC GCCGCCCTGG TCAGCACGTT CGCTGTCGTC CGGCACACCC GACAGAACGA GGAGACCGGT CGGGCGGAAC TGCTCGGCGC CGCGGTCGTT GGTCGACACG CGCTGCTCAC CGCCGCGTTG CTCGTCGTCG TCGGGGCGAA CGTGGCCGCC GGCGTGCTGC TCGGGCTGTC CTTCGCGGCC ACGGGCCTGC CGCTGGCCGG TTGCCTTGCC GCGGGCGGGG CGATCGCCGG GGTCGGCGTC GCCTTCACCG CCGTCGCCGC CGTAACCGCC CAGCTCACGG TCACCTCCCG GGGCGCGAAC GCGCTCGCCG CGGCCGCCGT GGGTGTGGCG TTCCTGCTCC GCGCCGCCGG GGATGTCCTC GGGGAGCGGC ACGGCCTGCG TCTGGAGAGC GCCTGGCCGT CGTGGCTGTC CCCGCTTGGT TGGGGCACCC AGGTACGCGC GTTCGGCGCG GAGCGGTGGT GGGTCCTGGG CCTGCCGGTT GCGCTGCTGG CCGTTGCCAC CCTGGCCGCG TTCGGGCTCG CCCGGCGGCG GGATCTCGGG GCCGGGCTCC TCGCCGCCCG ACGCGGGCCG GCCCACGCGG CTGCCGGCCT GCTCAGCCCG ATCGGCCTGG TCTGGCGGCT GCACCGTGGC TCGCTGGTCG GCTGGTCGAC TGCTGTGGTG GTCCTCGGGG TCTCGATGGG TTTCGCCGCC GACGAGGTCA ACGACATGGT CGCCGAGAAT CCGGCCGCCG CCGAGGTGAT CGCCGCGATG GGTGGCGGGG TCGACCTGGT CGACGCGTTC CTCGCCGCGA TGCTGGGGCT GTTCGCGCTG ACCGTCGGCG CGTACGTGGT GCAGGCGTTG CTGCGCACCC GTGCCGACGA GTCGGACGGC GTCCTGGAGG CGGTGCTCGC CACCGCGGTG AGCCGAGGTC GCTGGTTGAC GACCCAGGTG ACGGGCACGG TGTTGGGCGC GGCGGTCCTC GTGCTGTTGG CCGGGCTGTC GACCGGCCTC GGGTACGGAC TCGCGGCCGG TGACCCGATC GGGTGGACGC TCCATCTGGG TGGGGCGGGA CTGCTGCAGC TGCCGGCGCT GCTGGTGGTG GCGGGCTTGG TGACCGCGTT GCTCGGGCTG GCTCCCCGAT GGTCGGTGGC GTCGTCCTGG GCGGTGCTGA TCGGGTTCCT GCTGCTTGGG CAGCTCGGCG CGGCGCTCGA CCTGCCGCAG GCGGCACTCA ACCTTTCGCC CTACACCCAT GTCCCCTCGG TGCCGGCGGT CGAGGTGACC GTGCTGCCGC TTGTGCTGCT CACCGGCGTG GCCGGGATGC TGCTGACTGC CGGCCTGGCC GGCTTCCGTC GCCGCGACGT TCCCAGCTGA
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Protein sequence | MSAFTGTGRL ARLVLRRDRI KLGVWVLGTP LLGVALASSV TEFYPDEATR LGYAEAALTS VVARAFNGPI FSADLGSIVV VETYLTLALL AALVSTFAVV RHTRQNEETG RAELLGAAVV GRHALLTAAL LVVVGANVAA GVLLGLSFAA TGLPLAGCLA AGGAIAGVGV AFTAVAAVTA QLTVTSRGAN ALAAAAVGVA FLLRAAGDVL GERHGLRLES AWPSWLSPLG WGTQVRAFGA ERWWVLGLPV ALLAVATLAA FGLARRRDLG AGLLAARRGP AHAAAGLLSP IGLVWRLHRG SLVGWSTAVV VLGVSMGFAA DEVNDMVAEN PAAAEVIAAM GGGVDLVDAF LAAMLGLFAL TVGAYVVQAL LRTRADESDG VLEAVLATAV SRGRWLTTQV TGTVLGAAVL VLLAGLSTGL GYGLAAGDPI GWTLHLGGAG LLQLPALLVV AGLVTALLGL APRWSVASSW AVLIGFLLLG QLGAALDLPQ AALNLSPYTH VPSVPAVEVT VLPLVLLTGV AGMLLTAGLA GFRRRDVPS
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