| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2683 |
|---|
| Symbol | |
|---|
| ID | 5706766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3057128 |
|---|
| End bp | 3058375 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641272141 |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_001537511 |
|---|
| Protein GI | 159038258 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.688233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000166477 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGC GGGCGGTGGT GACCGGGATC GGGGTGGTCG CGCCCAGCGG CGTCGGCGCG
GACGCGCACT GGCGGACCGT GCTCAGCGGC ACCCGGCACA CCGGGCCGAT AACCCTGTTC
GATCCGGCCG GCTATCCGAC CCGCTTCGGT GGCGAGGTGC CGGGGTTCGA GGCCGCCGCG
TACGCCGACA ACCGCCGGCT GGTGCAGACC GACCGGTGGA CGCACCTCGG GTTCGCCGCT
ACCCAGCTGG CCCTGGCCGA CGCGGGGCTG CCCGAGCGGG CTCCCGACCC GTACGGCTAT
GCGGTCACTC TGGCCAGTTC GTCCGGCGGG AACCTGTTCG GGCAGCGGGA ACTGCAACGG
TTGTGGGGCG GTCCCACCCG GGCGGTCGGG GCGTACCAGT CGATCGCCTG GTTCTACGCC
GCCAGCGTTG GCCAGCTTTC CATCCACCAC CAGTTCAAGG GGCCGTGCGG GGTGCTGGTC
GCCGAGACCG CGGGTGGGCT GGACAGTCTG GCGCACGCGG CCCGAGCGGT CCGACGGGGC
ACTCCGGTGG TGATCGCGGG GGCCACCGAG TGTCCGTTGA GCCCCTACGC ACTCGCCTGC
CAGCTCGCTT CCGGGCTGCT CAGTGAGGTG GCGGATCCGG AACGGGCGTA CCGGCCGTTC
GATGTGGCGG CGAGCGGCTA CCTGCCGGCG GAGGGGGGTG CGGTGTTCGT GGTGGAGGAG
CTGGGCCACG CCGTGGCCCG GGGGGCCCGT ATCTATGGTG AGGTGCGGGG ATGGGCCGCC
ACCCATGACG GTGCCCACAC CACTGTGGAT ACCGACGGTG ATCCGGTGCA GTACGCCCGC
GCGATGCGGC TGGCGCTGGA CCGGGCCGGG GTCGGCGCGG ACCTGGTCGA CGTGGTGCTG
CCCGACGCGC TCGGGGTGCC CCGCTACGAC CGTAGCGAGG CGACCGCCCT GCGGGCCGTG
TTCGGGGACC GGCTTCCGCC GGTGACGACG CACAAGTCGC TGACTGGGCG GGCCCATCAG
GGTGGAGCCG CCTTGGACGT GGCGACCGCG TTGCTCGCCT TTGCCCACGA CACGTTGCCC
GCGTCCGCCG GGCCGGACGA CGTCGCGCCG GGCTGCGAGC TGGATTTCCT GCGGGAGCAA
CGACAGCCGG TGAACCGGCT GTCGTTGGTG TGTGCCCGCG GCTTCGACGG ATTCAACAGT
GCGCTGGTCC TGCTTGGGGC GGCGCCGAGC AGTGGCGGTG AGCAATGA
|
|---|
| Protein sequence | MTARAVVTGI GVVAPSGVGA DAHWRTVLSG TRHTGPITLF DPAGYPTRFG GEVPGFEAAA
YADNRRLVQT DRWTHLGFAA TQLALADAGL PERAPDPYGY AVTLASSSGG NLFGQRELQR
LWGGPTRAVG AYQSIAWFYA ASVGQLSIHH QFKGPCGVLV AETAGGLDSL AHAARAVRRG
TPVVIAGATE CPLSPYALAC QLASGLLSEV ADPERAYRPF DVAASGYLPA EGGAVFVVEE
LGHAVARGAR IYGEVRGWAA THDGAHTTVD TDGDPVQYAR AMRLALDRAG VGADLVDVVL
PDALGVPRYD RSEATALRAV FGDRLPPVTT HKSLTGRAHQ GGAALDVATA LLAFAHDTLP
ASAGPDDVAP GCELDFLREQ RQPVNRLSLV CARGFDGFNS ALVLLGAAPS SGGEQ
|
|---|
| |