| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1890 |
|---|
| Symbol | |
|---|
| ID | 5704192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2178337 |
|---|
| End bp | 2178999 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641271391 |
|---|
| Product | DNA-3-methyladenine glycosylase |
|---|
| Protein accession | YP_001536766 |
|---|
| Protein GI | 159037513 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.118243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0250211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGCGT ACCCCGAAGC GGTTGACGAT CTCGCACGGC TGGCCGTCCT GCTCGGCGGG
CCGGTCGTGC CGGCGGCCCG CGGCCTGCTC GGCGCCCGCC TTTCGGCCGG CGGGGTCACC
GTGCGGATCA CCGAGGTCGA GGCATATGCG GGCACTGCCC AGGACCCGGC CTCACACGCC
CACCGTGGGC GCACCCCCCG CAACGCGGCG ATGTTCGGCC CCGCGGGTCA CGCCTACGTC
TATTTCACCT ACGGCATGCA CTGGTGCCTG AACGTGGTGA CCGGGCCCGA CGGGGAGGCA
TCGGCGGTGT TGGTGCGAGC CGGTGAGGTG GTCACGGGCC TCGCCCAGGC CCGATCCCGC
CGTCGGGCGG CGCGATCCGA CGGGGATCTC GCCCGAGGAC CGGCCCGGCT CTGCGCCACG
CTGGGCGTCG ACCGCTCCGC CTACGGGCGG AACCTGCTCG GCGACGGCCC GGTGCGGCTG
CGTCCCGCGC TCGAACCGGT GCCAGACCCG GCCGTGGCGG CCGGGCCGCG GGTGGGCGTG
ACCGGGGCGC ATGACGTGCC GTGGCGGTTC TGGATCACAG GTGACCCGAC CGTCAGCGCC
TACCGTCGCC ACGTACCCCG GCGGCGCGCC GCTGAGGCGG CACGGCCGGT GGCGGAGACC
TGA
|
|---|
| Protein sequence | MEAYPEAVDD LARLAVLLGG PVVPAARGLL GARLSAGGVT VRITEVEAYA GTAQDPASHA
HRGRTPRNAA MFGPAGHAYV YFTYGMHWCL NVVTGPDGEA SAVLVRAGEV VTGLAQARSR
RRAARSDGDL ARGPARLCAT LGVDRSAYGR NLLGDGPVRL RPALEPVPDP AVAAGPRVGV
TGAHDVPWRF WITGDPTVSA YRRHVPRRRA AEAARPVAET
|
|---|
| |