Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1889 |
Symbol | |
ID | 5704191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2175677 |
End bp | 2178259 |
Gene Length | 2583 bp |
Protein Length | 860 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271390 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001536765 |
Protein GI | 159037512 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0471823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0591915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTTCCG CATCCGCCCT GTTCCCGGCC GTGGAAGTGC CGTTCGTCCG CGACCTGGCA ACACATGGCG AGCGCACCGC CATCGTCACC CGGGACGGGG AGATCTCGTA CACCGACCTC GCCGCCCGGG TCGCGCGAAC CGCCGAGCAA CTCGGCGTGG GGCGACGGCT GGTGCTGGTC GTCGGGGCGA ACACGGTCGA CTCGCTGGTG GCGTACCTGG CCGCGATGCA CGCAGGGCAC CCGGTCCTGT TGGTGCCCGA CGACCGGGCC TCGGCGCTCG CCGGCCTGAT CGAGGCGTAC GACCCGGACG TGCTCGTCGG CGCGGCCGAC GAGGGCTGGC AGGTCGAGCA CCGCCGCGCC GCCTCCGTGC ATGACCTGCA CCCCGACCTG GCCCTGCTGC TGTCCACCTC GGGGTCGACC GGCTCCCCGA AGCTGGTCCG GCTCTCCCAC ACCAACCTGC AGGCCAATGC GGAGGCGATC GGCGAGTACC TGGAGATCCG CGACACCGAC CGGGCGGCCA CCAGCCTGCC ACTGCACTAC TGCTACGGCC TGTCGGTGGT CAACAGCCAC CTGGCCCGAG GCGCCGCGCT GGTGTTGACC GACCTGTCGG TCGCCGACAC CTGCTTCTGG GAGTTGTTCC GGGATGCCCG GGCCACCACC CTCGCCGGGG TGCCGTACAC CTTCGACCTG CTGGACCGGG TCAACTTCGC CGCTATGGAC CTGCCACACC TGCGATACGT CACCCAGGCC GGTGGTCGGC TCGCACCGGA CCGGGTACGT CGGTACGCCG AGCTGGGTCG GAGCGCGGGC TGGGACCTCT TCGTCATGTA CGGGCAGACC GAGGCGACCG CGCGGATGGC GTACCTTCCA CCGGACCTCG CCTTCGACCA TCCGACGGCG ATCGGGGTGC CGGTGCCCGG CGGTGACTTC CGGCTCGCCC CGGTCGCCGA CCATCCGGAT CCGGAGGTCG GCGAGCTGGT CTACGCCGGC CCGAACGTCA TGCTCGGATA CGCCCACTCT CCCGCCGATC TGGCGCTGGG TCGCACCGTC GACGAGCTGT ACACCGGCGA CCTGGCTCGG CATACCGCAA CTGGCGTGTG GGAGATCGTC GGCCGACGCA GCCGATTCGC CAAGATTCTC GGGCTGCGGA TCGACCCGCA GCAAGTCGAG GCGCTGCTGT CCGCGCACGA TGTCACTGCC AGCTGCATCG GCGGTGACGG CGAACTGATC GTGGCGACCC TCGGCGACGA AGACCCACGC CGGGTGCGCC GCCTGGTCGC CGGGGAGGTG GGGCTGCCAC CTCGGGCCGT GCGAGTGCTC CCACTGGCCG AGCTGCCCCG GCTCGCCTCC GGCAAGCCCG ACCTGGTGGC GCTGCGTGAG CTCGCCGCCG AGGAGACGCC ACCGCCGGCG GCGCCGGCCG GCGACCTCTG CACGCTCTAC GCGGAGGTGC TCGACCGCAC CGACGTCACC CCGGACCGCA GCTTCGTCGA CCTCGGCGGG GACTCCCTGT CGTACGTCGA GATGTCGGTG CGGTTGGAGC GAGAGCTCGG TGAGCTGCCG GCGGACTGGC ACACCCTGCC GATCGCCGAC CTGCGCCGAT CCACCGCGGC CCCCGGACGC GCGCCACGGC CACGCCGGCG GCGTTCGCTG GAGACCAGCG TGGCGCTGCG GGCAGCGGCA ATCGTGCTGA TCGTCGGCTC ACACATCCCG CTGTTCACCC TCACCGGTGG GGCGCACCTC CTGCTCGCGG TGGCCGGATT CAACTTCGCC CGATTCCAGC TCACCGGCGC CCGGCGGGGA GAGCGGCTGC GGCAGATCGG CGCCAGCCTG CTGCGCATCG TGCTGCCCAC CGTGGCGTGG ATCGGCGCGG TGATGCTGGT CAACGACCAG TACCGGCTGA GCACCCTGCT GCTGGCCAAC AGCATCCTGC GGCCGGACGA CGCCCCACAC GGCTGGCACT TCTGGTTTGT CGAGGCGGTG GTCTACCTTC TGGTGGCGCT GGCCGCGCTG CTCGGCCTGC GCCGAGTCGA CCGCTGGGAG CGGCGGCACC CGTTCGCGTT TCCGCTGGGG CTGACCGCAG TCGCGCTTCT CGGCCGGTAC GACGTCTTCG GCGTCGATGC GGGGCACGAC CTGCCGGCGG CGCTCGTGGC CGGCTGGCTG TTCACGCTCG GGTGGGCGGC CGCGCGGGCC GACGGGGTAC GGCAGCGGCT GTTGGTCACG CTCGCCGCGG TGGCCACCGT GCCGGGCTTC TTCGGGCAGC CTGCCCGCGA AGCCCTGATC GTGGCCGGCT TCGCGTTACT GACCTGGCTG CCGACCGTGC CCAGCCTGGG CGTGCTGAAC AAGGTGGCCG GGGTGCTCGC CGGTAGCTCG CTCTACATCT ATCTGACCCA CTGGCAGGTC TTCCCGCACC TGCGGGAGCT GCCACTGGTC GCCCTCGCCG CATCGCTCGC GCTCGGCATC GCGTACGGCG CGCTGGTCAG CCGCGTCTGG CGTTGGGCCG CCACCCGCCG CCCGGCCCGG CCGCGCGGCG CGGCCGGTCG GCGGGGGCGA TCCGCTCTGC GACCCGCCCC CGCCCGTCGG TGA
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Protein sequence | MTSASALFPA VEVPFVRDLA THGERTAIVT RDGEISYTDL AARVARTAEQ LGVGRRLVLV VGANTVDSLV AYLAAMHAGH PVLLVPDDRA SALAGLIEAY DPDVLVGAAD EGWQVEHRRA ASVHDLHPDL ALLLSTSGST GSPKLVRLSH TNLQANAEAI GEYLEIRDTD RAATSLPLHY CYGLSVVNSH LARGAALVLT DLSVADTCFW ELFRDARATT LAGVPYTFDL LDRVNFAAMD LPHLRYVTQA GGRLAPDRVR RYAELGRSAG WDLFVMYGQT EATARMAYLP PDLAFDHPTA IGVPVPGGDF RLAPVADHPD PEVGELVYAG PNVMLGYAHS PADLALGRTV DELYTGDLAR HTATGVWEIV GRRSRFAKIL GLRIDPQQVE ALLSAHDVTA SCIGGDGELI VATLGDEDPR RVRRLVAGEV GLPPRAVRVL PLAELPRLAS GKPDLVALRE LAAEETPPPA APAGDLCTLY AEVLDRTDVT PDRSFVDLGG DSLSYVEMSV RLERELGELP ADWHTLPIAD LRRSTAAPGR APRPRRRRSL ETSVALRAAA IVLIVGSHIP LFTLTGGAHL LLAVAGFNFA RFQLTGARRG ERLRQIGASL LRIVLPTVAW IGAVMLVNDQ YRLSTLLLAN SILRPDDAPH GWHFWFVEAV VYLLVALAAL LGLRRVDRWE RRHPFAFPLG LTAVALLGRY DVFGVDAGHD LPAALVAGWL FTLGWAAARA DGVRQRLLVT LAAVATVPGF FGQPAREALI VAGFALLTWL PTVPSLGVLN KVAGVLAGSS LYIYLTHWQV FPHLRELPLV ALAASLALGI AYGALVSRVW RWAATRRPAR PRGAAGRRGR SALRPAPARR
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