Gene Sare_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1664 
Symbol 
ID5703434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1916055 
End bp1917044 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content73% 
IMG OID641271168 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001536543 
Protein GI159037290 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG AACCCGTCCT GTCCGTCGCG GATCTGACCG TGACGATCGG TACCCGCCGG 
GGCCCGGCCC GTGCCGTCGC CGGCGTCGAC TGGTCCGTGC GGGCGGGAGA GACCCTCGCC
CTGGTCGGTG AGTCGGGCAG CGGCAAGAGC ATGAGCGTGC TCGCCGCCAC CGGCCTCGCG
CCCCGCCCGG CCCGGGTCAC CGGGCGGGTG CGGCTGCTCG GCACGGACCT TGTCGCGCTG
TCGGACGCGC GCCGCCGGCG GATGCGGGGG CGGCACGTCG GGTTCGTCTT CCAGGACCCG
ATGACCTCGT TGAACCCGGT GCTGACCGTG GGCCGCCAGA TCGGCGAGGC CGGCGAGGTG
CACCTGGGGC TGACCCGGCG GGCTGCCCGG GCACGCGCCA TCGAGATGCT CGAACTCGTC
GGCATCCCCT CGGCCACCGA ACGGGTGGAC GCCTATCCAC ATCAGCTCTC CGGCGGGATG
CGCCAGCGCG CGGTGATCGC CATGGCTCTG GTCTGTGAGC CGGACCTGCT CATCGCCGAC
GAGCCGACCA CCGCTCTCGA CGTGACCACG CAGGCCCAGA TCCTCGAGCT GGTCGCCGGT
CTGCAACGGC GCCTCGGTAT GGCCGTCGTG TGGATCAGTC ACGATCTCGG TGTCGTCGCC
GGCATCGCGG ACACGGTGGC CGTCATGTAC GGGGGTCGGA TCGTCGAGCA GGGGGCGGTC
GACGCGGTCT TCGCGGACCC GGCGCACCCG TACACGGCCG CCCTTCTCGC CGCGCGGCCG
GATCCGGATG CGGACAGCAC CGAGCTGGTC ACGATTGCGG GGACGCCACC CAGCCCGCTG
GAACTTCCCG CGGGGTGTGC CTTCTGGCCC CGCTGCCCGG TGCGGGGTGA CTCCCGCTGC
GAGCGGGAGT TGCCGTCGTT GGTGCCGGTC GCGCCGGGCC ACCAGGTCCG GACCTTCTAT
CCGCACCGGC CGAGGGGGGA GGACGGATGA
 
Protein sequence
MNDEPVLSVA DLTVTIGTRR GPARAVAGVD WSVRAGETLA LVGESGSGKS MSVLAATGLA 
PRPARVTGRV RLLGTDLVAL SDARRRRMRG RHVGFVFQDP MTSLNPVLTV GRQIGEAGEV
HLGLTRRAAR ARAIEMLELV GIPSATERVD AYPHQLSGGM RQRAVIAMAL VCEPDLLIAD
EPTTALDVTT QAQILELVAG LQRRLGMAVV WISHDLGVVA GIADTVAVMY GGRIVEQGAV
DAVFADPAHP YTAALLAARP DPDADSTELV TIAGTPPSPL ELPAGCAFWP RCPVRGDSRC
ERELPSLVPV APGHQVRTFY PHRPRGEDG