| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1624 |
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| Symbol | |
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| ID | 5703405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1859268 |
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| End bp | 1860944 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641271132 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001536507 |
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| Protein GI | 159037254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.529123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAACCC AGCGTTACGA TTACGTCATC GTTGGTGGCG GTTCAGCCGG CAGCGCGCTC
GCCGACCGAA TGTCCGCCGA CCCGGGCAAC CGGGTTCTCG TCCTGGAAGC GGGCCGTCCC
GACTACCCAT GGGACGTCTT CATCCACATG CCGGCGGCCC TGCCGTTCCC GATCGGGAGC
CGGTTCTACG ACTGGCAGTA CTCGTCGGAG CCCGAGCCGC ACATGCACGG GCGACGCATC
TACCACGCCC GGGGCAAGGT ACTGGGCGGG TCGAGCAGCA TCAACGGGAT GATCTTCCAG
CGGGGTAACC CGTTGGACTA CGAGCGGTGG GCGGCCGATC CGGGCATGGA GACCTGGGAC
TTCGCCCACT GTCTGCCGTA CTTCAACCGG ATGGAGTCCG CCCTGGGAGC GGATCCGGAC
GACCCGTACC GTGGCCACGA CGGCCCGCTG GTGTTGGAGC GTGGCTCCGC GGAGAACCCG
GTGATCCAGG CCATGCTCGA GGCGGCGGAG CAGGCCGGCT ACCCGCGCAC CACCGACGTC
AACGGTGCGC AGCAGGAGGG TTTCGCCCCG TTCGACCGGA ACGTTCGTCG TGGTCGGCGG
TTCTCCGCGG CCCAGGCCTA CCTGCGCCCG GCGATGAAGC GACCCAACCT CGAGGTACGT
ACCCGCGCGT TCGTCACCCG CGTCATCTTC CAGGGCACCC GCGCCGTGGG TGTCGAATAC
ACCCGAGGCC GGGGCACAAC ACCCCACCGG GTGTACGCCA ACGAGGTGAT CCTCAGCGGT
GGTGCGATCA ACACGCCACA GTTGCTGCAA CTGTCCGGCG TGGGTAACGC CGACGAACTG
CGCGGCCTGG GCATCGACAC CGTCGCGAAC CTGCCCGGGG TGGGCGAGAA CCTGCAGGAC
CACCTGGAGG TCTACATCCA GCACGCCTGC ACCCAGCCCG TGACGATCCA GCCCTACCTG
AACTGGCGCT ACGCGCCGTG GATCGGCGCG AAGTGGCTGT TCGGACGCAC CGGTCTGGGC
GCCACCAACC ACTTCGAGGC GGGTGGCTTC GTCCGGAGCA ACGACACCGT CGACTACCCG
AACCTCATGT TCCACTTCCT GCCGATCGCG GTCCGGTACG ACGGCACGTC CCCCGCCGGT
GACCACGGTT ACCAGGTGCA CATCGGGCCC ATGTACTCCG ACGCCCGCGG CTCGGTCAAA
ATCGTCAACC GTGACCCTCG GGTGCACCCC GCCCTGCGCT TCAACTACCT CTCCACCGAG
CAGGACCGGC GGGAGTGGGT GGAGGCGGTC CGGGTGTCCC GCGACATTCT CGGCCAGCCG
GCGCTGGCCC CGTTCAGCGG CGGTGAGATC TCCCCCGGGC CCGCAGTACA GACCGACGAG
GAGATCCTCG ACTGGGTGGC CCGAGAGGGC GAGACCGCGC TGCACCCGTC CTGCACGGCC
AAGATGGGCA CCGACGACAT GTCCGTGGTG AATCCCACCG ACATGCGGGT GCACGGGGTC
ACCGGGTTGC GGGTGGTGGA CGCGTCGGTG ATGCCCTACG TCACCAACGG CAACATCTAC
GCTCCCGTGA TGATGGTCGC CGAGAAAGCA GCGGACCTCA TCCTGGGCAA CACGCCGTTG
CCGCCGTCGA CGCTGGACTT CCACCGGCAC GAGCACGGCC CCTCGGCGGT GAAGTGA
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| Protein sequence | MTTQRYDYVI VGGGSAGSAL ADRMSADPGN RVLVLEAGRP DYPWDVFIHM PAALPFPIGS
RFYDWQYSSE PEPHMHGRRI YHARGKVLGG SSSINGMIFQ RGNPLDYERW AADPGMETWD
FAHCLPYFNR MESALGADPD DPYRGHDGPL VLERGSAENP VIQAMLEAAE QAGYPRTTDV
NGAQQEGFAP FDRNVRRGRR FSAAQAYLRP AMKRPNLEVR TRAFVTRVIF QGTRAVGVEY
TRGRGTTPHR VYANEVILSG GAINTPQLLQ LSGVGNADEL RGLGIDTVAN LPGVGENLQD
HLEVYIQHAC TQPVTIQPYL NWRYAPWIGA KWLFGRTGLG ATNHFEAGGF VRSNDTVDYP
NLMFHFLPIA VRYDGTSPAG DHGYQVHIGP MYSDARGSVK IVNRDPRVHP ALRFNYLSTE
QDRREWVEAV RVSRDILGQP ALAPFSGGEI SPGPAVQTDE EILDWVAREG ETALHPSCTA
KMGTDDMSVV NPTDMRVHGV TGLRVVDASV MPYVTNGNIY APVMMVAEKA ADLILGNTPL
PPSTLDFHRH EHGPSAVK
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