Gene Sare_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1542 
Symbol 
ID5703523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1777552 
End bp1778106 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content72% 
IMG OID641271053 
Producthypothetical protein 
Protein accessionYP_001536429 
Protein GI159037176 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03086] conserved hypothetical protein TIGR03086 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.272764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00246606 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGACGA CCCCCGCCGT GGACCTGTAC CGGCAAGCAG GCGCGCACGC GTCGACGATC 
ATGGCAGGCA TCCGGCCGGA ACACCTGGCA GAGCCGACTC CCTGCGCGAA GTGGACAGTG
CAGGACATCG TCGACCACCT GGTCGGCGGC ACCGGCTACC TGCTGGCCGC GGCCACTGGC
GGCCAGCCTG GCGATCCGGC GAGCCGGGCC ACCGCCGACC GGTTCACCAC GGGTCACGCC
GCTGTCCTCG ACGCGGTGGC CCAGCCCGGT GCGATGGAGC GCCGTTGCAT GTCACCGCTG
GGATTCGAGT GGAGCGTCCG GGAAGCCGTC GCCGCCACCT TCATGGACGT CCTTGTCCAC
AGCTGGGACC TCGCCGCGGC CACCGGCCAG GACACCCGTC TCGACCCCGA TCTGGTCCAG
GCCTGCTGGG AGATGTTCGT CCCGGAGATG CCCGCACGGG GCCGGGAAAC CGGCCTGGTC
GGCCCGGAGG TCGCGGTACC CGCCGACGCC CCGCTGCAGG ACCGCCTGCT CGGCGCCATG
GGCCGCCAAC CATGA
 
Protein sequence
MVTTPAVDLY RQAGAHASTI MAGIRPEHLA EPTPCAKWTV QDIVDHLVGG TGYLLAAATG 
GQPGDPASRA TADRFTTGHA AVLDAVAQPG AMERRCMSPL GFEWSVREAV AATFMDVLVH
SWDLAAATGQ DTRLDPDLVQ ACWEMFVPEM PARGRETGLV GPEVAVPADA PLQDRLLGAM
GRQP