| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1534 |
|---|
| Symbol | |
|---|
| ID | 5708325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1769671 |
|---|
| End bp | 1770495 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641271045 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001536421 |
|---|
| Protein GI | 159037168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00325802 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCAG CCAGCGACGC GCCGGTGCTC GTCGGGGTCG GCTCGGAACA GGACCTGCCG
CTGGTCCGGC TCGCCGCACA GGAGGCCGCC GCCTTCGGGC GTCCCCTGCG GCTGATGCAC
TCCTTCGACT GGGGGGAGGC CTTCAAGGCA CCGTCGATCG CCGGCCCACA CGACGCGGCG
CAGGACCTCC TCGACCGCGC CGTCGAGCTC GCCGGGAAGG TCGACGATTC CCTGCCGGTA
CGCGACGAGA TCGCCGAGGG ATCGACGGTG GAGACGCTGA TCCGTCGGTC GGAGGCAGCC
TTCCTGGTCG CGGTCGGTGA CAGCGGCATG AGCACCAGAC AACCCGGCTG CGCCAACCCC
GCCGAGACGC CGGCGGTGCA GGTCGCCGCA AGAGCCGGTT GCCCCGTGCT GGTGGCCCGC
CGTGATCCAC CGCCGGAGGG GCCGGTGCTG GTCGGCGTGG ACGGCTCGAC CGGCTCCCGG
CAGGCCCTGA GGTGGGCGTT CGACTGCGCT GTCCGCCGCG CGGGCCGCCT GGTCGCCCTC
CGGGTGGTGG ACCGGGGCCA CGACGAGAAC CCGGAGATCC TCGCCGAGAT CGTGGCGTCG
GTCGCCGATC GACAGCCGGC GGTGCCGGTG GAGTGTCACA CCATCCGCGG CACTCCCGGC
GATGTCCTCG TGGAGCAGTC CCGGTCGGCG CAGGTCGTGG TCCTGGCGGC GCGCGGTCAC
CAGCCCGGCC GAGGCATGAT CGGCTCGGCC GTTCAGTCCG TGCTCTACCA CTCGCCCACA
CCGGTGATCG TGGTGCGCGG GATCACCCCG GCGGACAGTC CCTGA
|
|---|
| Protein sequence | MTAASDAPVL VGVGSEQDLP LVRLAAQEAA AFGRPLRLMH SFDWGEAFKA PSIAGPHDAA
QDLLDRAVEL AGKVDDSLPV RDEIAEGSTV ETLIRRSEAA FLVAVGDSGM STRQPGCANP
AETPAVQVAA RAGCPVLVAR RDPPPEGPVL VGVDGSTGSR QALRWAFDCA VRRAGRLVAL
RVVDRGHDEN PEILAEIVAS VADRQPAVPV ECHTIRGTPG DVLVEQSRSA QVVVLAARGH
QPGRGMIGSA VQSVLYHSPT PVIVVRGITP ADSP
|
|---|
| |