| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1503 |
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| Symbol | |
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| ID | 5705481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1731369 |
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| End bp | 1733564 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641271010 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001536391 |
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| Protein GI | 159037138 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.293201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000197979 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACCGA GTAGACGGTG GGCGGTCCTG ATCGGCGTTG ACCAGTGCGG CCATGATGTG
CAACTGCCTC CGCTGCGTTT CGCTGAGAGC GACGCTCGCG CCATGCGTGA TGTTCTGCTG
GACCAGCAGA TCGGCACGTT TGACGACGGC GACGTGAGGC TACTGGTCGG TTCCGACGCC
ACATGGCGTG AGACCAAGGT ACTGCTGCGG GAACTCGCGC TTAAATCGGC GCCGTCGGAC
ATCTTGTTGG TCTACTTCGC CGGTCACACA CTTGTGCCTC AGTGGAGTGA CCAACTCGAC
GCCTATCTGG TCACGGCCGA CCTCGATGCG GATGTGCTTT CGCGGGAACC CGACAACGGA
CTGCGGATCT CCTTCCTCAA GAGGGACATC TTCGACGCCT TTGCGGGTGC CTCGTTTCTT
GTGCTTGACT GCTGCCACGC GGGTGTTTAC GCCGACGCGG CCAGACGCAA CGTCAAGGTG
CTACAGACGT ACGCAGAGGC GGTGGACAGG CCCCGGCACA ACGCGTTGCT CGCCTGTCCC
AGCGGATCGG TGACTCGCGA GAGCGTTGAG CACCAGCACG GGACGTTGAC CTACCACGTA
CTACGGGCGT TGCAGGGCGG GGCCGGCGAC GAGGCAGGAC GGGTGTCGTT CGCCCAGATG
GCAACCTTCG TTGCGGCACA GGGCATGGAT CCGCCACCGG TGCACACGGC GCATGTCTAC
GGCGCTACCA CCGTATTGAC CCAACCACCC ATGTCCCGAC ACGACCGTCA GGCTCTCAGC
AGCCCAGCAA ACCCTGGCGT CACGCGCCCC TGCCTCAACC CACTCGAGGA TCAGACAAGC
TCGATCCGGC AGCTCCTCAA TCGGGTATTC CGGGCGGACA TGCGCTCGGC GCATCAGCCT
CAGCAGGGCG AGCGCGACGG ACGAGTGGAA CTCATCCGGT ACGCGCTCGA CGCAGAGTCG
GCTGCGGTCG TGGACTTCAC GGGCTGCAGC ATCGGCGTGG TGAATCAGAC GGCGCGTTTC
GATAAGGAAG CGTTGCGCCC GATGCTCGAC CTTGCGGCGG GCGAGGCAGC TCAGCACCAG
AGAGCCACAC CGGGATACGT CGTTACGCAT GGCACCGGGC GCCGGATGCT CTGCGTGCCC
TTGTCGTTCG CCGGTGACCG CACTCTCACG CTCACCGTGG TCGACCCGGC CCTCGCTCAG
TTGGATATGG GTGAGCCGTT GGCCGTCATG CTCCGAGCGG TGTGGGACTC CGACCCGGTG
GCCGACCTCC TGCAGTCGGA GATGGCCGTT CTGACCGCTC TGCGTACCTC CTTCGGCCGA
TTGCCGGCGA AGCTCTACGA TGACGCCTTC AGCCTCTACC AGCAGCTGAT CAAATCGATG
ACGATGGTGT TTCAACCCGT TGTCGAGCTG GACCAACGCC CGGCTGGGGT ACAGGTACAT
AGCTTCGAGG CGCTGGCCCG CCGCCACGAT GGTGAGCTGC GCGCTCCCTG GCAGGCACTA
CGGATAGCGC ACGACTGGGG TGACCGCTTC ATCGTCGAGC GTGATGCGAT CCTCCTAGCC
AAGGCCGTCA GCTCCTACGT TGAGGCCGAT GCCCGCGCCG GCTGGCAGGG CACCAAACCG
CTGTCGGTCA ACGTGGCGGT CCGCTCGTTG CTCAGCGATG CGTACTTCGA ACAGGTGAGC
AAAGCGCTCA CCGAGGCGGG ATTGCATGCC CGAACCCTGA CGCTGGAGAT CTCCGAACAG
GATTCGATCA GTCCGGCTCC GGGCGAGCGA TGGCCCCAGG CGCCCCTGGT GTACTTCCAC
AATCGGCTTA CCAGGCTCGC ACGAGAGCTA CGGATCAGCT TCGCGGTCGA CGATTTCGGA
GTCGGCTACG CGTCGTTGGC GCGGATGGCC GAGTTGCCCC TTACCCAGAT CAAAGTTGAC
CGGGCGATAC TGCACCATCC CATGGCGCTA GAGGAGCTCA CCCTTGTGGC GCAGATCGCC
CGCTGGGCAA GCGACCAGGG ACAGACCGGT CACTCAAGGA CCGTCATCGT TGAGGGCTTC
GACGACGACG CACCTATCAG CCTCCACGAG ATCTTCGGCC TAGGTATCCA TCACGTGCAG
GGCTACTTCA GCGGATCGAT CGCCTCGTCT ACCCTGTGCG AGTTGGACCC GAGTGTCCAG
GAGCGAATCG CATCACTCGT GAGGGGCCAC AAGTGA
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| Protein sequence | MAPSRRWAVL IGVDQCGHDV QLPPLRFAES DARAMRDVLL DQQIGTFDDG DVRLLVGSDA
TWRETKVLLR ELALKSAPSD ILLVYFAGHT LVPQWSDQLD AYLVTADLDA DVLSREPDNG
LRISFLKRDI FDAFAGASFL VLDCCHAGVY ADAARRNVKV LQTYAEAVDR PRHNALLACP
SGSVTRESVE HQHGTLTYHV LRALQGGAGD EAGRVSFAQM ATFVAAQGMD PPPVHTAHVY
GATTVLTQPP MSRHDRQALS SPANPGVTRP CLNPLEDQTS SIRQLLNRVF RADMRSAHQP
QQGERDGRVE LIRYALDAES AAVVDFTGCS IGVVNQTARF DKEALRPMLD LAAGEAAQHQ
RATPGYVVTH GTGRRMLCVP LSFAGDRTLT LTVVDPALAQ LDMGEPLAVM LRAVWDSDPV
ADLLQSEMAV LTALRTSFGR LPAKLYDDAF SLYQQLIKSM TMVFQPVVEL DQRPAGVQVH
SFEALARRHD GELRAPWQAL RIAHDWGDRF IVERDAILLA KAVSSYVEAD ARAGWQGTKP
LSVNVAVRSL LSDAYFEQVS KALTEAGLHA RTLTLEISEQ DSISPAPGER WPQAPLVYFH
NRLTRLAREL RISFAVDDFG VGYASLARMA ELPLTQIKVD RAILHHPMAL EELTLVAQIA
RWASDQGQTG HSRTVIVEGF DDDAPISLHE IFGLGIHHVQ GYFSGSIASS TLCELDPSVQ
ERIASLVRGH K
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