Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1500 |
Symbol | |
ID | 5705478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1728907 |
End bp | 1729653 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641271008 |
Product | hypothetical protein |
Protein accession | YP_001536389 |
Protein GI | 159037136 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.508501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000119415 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGTCG GAACGCCGAT TACCGCCCTC TGGCCGACGC CGTCACCGGT GCCCCTCGAC GACGCCGCAC TCGCCGCCCG CTACGGCCGA ACCGACCGGC CACACCTCCG GGTGAACTTC GTGACCAGCG TCGACGGCGC GGTCACCGTC GACGGCTACT CGGCCGGGCT CTCCGGCGAG CCGGACAAGC GGGTCTTCGG CCTGCTGCGG ATGCTCTGCG ACGGCCTCGT GGTCGCCGGC GGCACGATGC GCCACGAGCG GTACCGACCA ATCCGCCTGG ACGAACGCCG CCGCGCCTGG CGCCGGGAGC ACGGCCTACC GCAGTACCCG ACCCTCGTCG TGGTCTCCGG CTCCCTCAAC CTCGACCCGG CCCAGGCCGC GTTCGTCGAC GCACCGGTAC GCCCGGTCGT GCTCACCCAC GCCGCCGCCA CCGCCCCGCC CGGCCTGGCC GAGGTCGCCG ACGTCGTCGA GTGCGGCGAC GACCGGGTGG ACCTCACCGC CGGCCTGGCC GAGCTGCGCC GCCGCGGGCT CGGTCAACTG CTCTGCGAGG GCGGGCCACA CCTGTTCGGC GCGCTCACCG CAGCCGACCT GGTCGACGAG GTCTGCCTGA CCCTCGCCCC GCTGCTCGCC GGCCCCGGTC CCGGCCGGAT CACCGCCGGT GGGCCCAGCC CGGTGCGGCA CCTGCCGCTG CGGCACGTGC TCGCCGCCGC CGACGGTGGA CTGCTGCTCC GCTACACCCG CGACTGA
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Protein sequence | MTVGTPITAL WPTPSPVPLD DAALAARYGR TDRPHLRVNF VTSVDGAVTV DGYSAGLSGE PDKRVFGLLR MLCDGLVVAG GTMRHERYRP IRLDERRRAW RREHGLPQYP TLVVVSGSLN LDPAQAAFVD APVRPVVLTH AAATAPPGLA EVADVVECGD DRVDLTAGLA ELRRRGLGQL LCEGGPHLFG ALTAADLVDE VCLTLAPLLA GPGPGRITAG GPSPVRHLPL RHVLAAADGG LLLRYTRD
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