| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1486 |
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| Symbol | |
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| ID | 5707491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1712688 |
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| End bp | 1713713 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641270994 |
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| Product | DNA polymerase LigD polymerase subunit |
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| Protein accession | YP_001536375 |
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| Protein GI | 159037122 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00018157 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTGGCG CGAAGGCCGT AGCCGAGGAG ATCGAGGTCG CCGGGCGTCA CGTCCGGCTC
AGCAGCCCCG ACCGGGTGAT GTTCCCCCAA CGGGGGTTCA CCAAGGCCGA CGTGTTCCAC
TACTACCTTG CCGTCGGTCC CGGCATCATG CGCGCCCTCG GCCAGCGGCC GACCACCCTG
CAACGCTTCC CCGAGGGAAT CGAGGGGGAG GCGTTCTTCC AGAAGCGGGT GCCCGCGCGG
GGGATGCCGT CCTGGGTGCA CACGGCGAAG ATCAGCTTCC CCAGTGGCCG GACGGCGGCC
GAGCTGTGCC CGGCCGATCT GGCCCACGTG GCGTGGGCGG CCCAGATGGG CACCGTGGTG
TTCCACCCGT GGCCGGTCCG CGCCGCCGAC CCGGACCGCC CCGACGAGCT GCGGATCGAC
CTCGATCCGC AGCCTGGCAC CGACTTCGCC GACGCGGCGC GAGCCGCCTC CGAGCTGCAC
GGGATCCTGA CCGAGCTGGG CGCCCCCGGT TGGCCGAAAA CCTCCGGTGG CCGGGGCGTC
CACGTCTATC TGCGCATCCG GCCGCACTGG ACGTTCGTCG AGGTCCGGCG GGCGACCATC
GCCCTGGCCC GGGAGCTGGA GCGGCGCCGG CCCGAGCTGG TCACCACCGC GTGGTGGAAG
GAGGAGCGCG GCGCCCGGGT TTTCGTCGAC TACAACCAGA TGGCCCGGGA CCGGACGATC
GCGTGTGCGT ACTCGCTGCG GGCCAACGCC CGCGCCACCG TCTCCACCCC GCTCGCCTGG
GACGAACTGG CCGACGTCGA CCCGGATGAC TTCGACCTGC GCAGCGTGCC GGCGCGGCTG
GCCGAGCGCG GCGACCCGCA CGCCGACATC GATGACGCCG CGTGGGACAT CACGCCCCTG
CTGGAATGGG CCGAACGGGA CGCCGCCAAC GGGCAGGGTG ACCTGCCCTA CCCGCCGGAA
CACCCCAAGA TGCCCGGCGA GCCGAAGCGG GTGCAGCCGT CCAAGGACCG AGACCGCCCC
CGCTGA
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| Protein sequence | MGGAKAVAEE IEVAGRHVRL SSPDRVMFPQ RGFTKADVFH YYLAVGPGIM RALGQRPTTL
QRFPEGIEGE AFFQKRVPAR GMPSWVHTAK ISFPSGRTAA ELCPADLAHV AWAAQMGTVV
FHPWPVRAAD PDRPDELRID LDPQPGTDFA DAARAASELH GILTELGAPG WPKTSGGRGV
HVYLRIRPHW TFVEVRRATI ALARELERRR PELVTTAWWK EERGARVFVD YNQMARDRTI
ACAYSLRANA RATVSTPLAW DELADVDPDD FDLRSVPARL AERGDPHADI DDAAWDITPL
LEWAERDAAN GQGDLPYPPE HPKMPGEPKR VQPSKDRDRP R
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