| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1477 |
|---|
| Symbol | |
|---|
| ID | 5706070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 1707300 |
|---|
| End bp | 1707647 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641270985 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536366 |
|---|
| Protein GI | 159037113 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4319] Ketosteroid isomerase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0455495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000147167 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCG AAGACCTCAC CCGTCTGTTC GTCGAACGCT CCAACGCCGG CGACGCCGAG
GGGGTCGCCG CGCTCTACGA GCAGGACGCC GTCATGGCCT ACCCGCCCGG CGGTCAGACG
GTCGGACGCG CGGCGATCCA GGCCCTGTGG GAGAAGGTGC TCGCCAACCG GCCACACTTC
GAACCGGAAG AGCCGCTGCC AACGCTGGTC AGCGGCGACC TCGCCCTCAC CTCGACACCG
CCGAGTGACG GCGCGGGCGC CCGTGCACAG GTGGTCCGCC GCCAACCGGA CGGTTCCTGG
CTACGCGTCC TCGACCAGCC GGAGTTCACC ACGCCCACCT CGGGGTGA
|
|---|
| Protein sequence | MKPEDLTRLF VERSNAGDAE GVAALYEQDA VMAYPPGGQT VGRAAIQALW EKVLANRPHF
EPEEPLPTLV SGDLALTSTP PSDGAGARAQ VVRRQPDGSW LRVLDQPEFT TPTSG
|
|---|
| |