| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1472 |
|---|
| Symbol | |
|---|
| ID | 5704438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1702277 |
|---|
| End bp | 1703179 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641270980 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536361 |
|---|
| Protein GI | 159037108 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.355902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000213792 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCAAC CACCGACCGA CCCGGCCGAG CCCTCGTCGC AGCCCGCGGT ACCTGGGTCG
CAGCCCGCGG TGCCTGGGCA GCCAGCCGCC GAGGACGCCG GGTACGACCG GTACGCGCAG
GGCGCAGCCG TCCCACCGGC GCAGGGCGGG GCCGTCCCGC CGCCGCAGGA CGAACCCGGT
GGGGCCGGAC CGGCCCTCCC GTCGCCCGCC ACGTCCAGCC CTCCCGGCCC GGCACTGGCC
GGCGACAACG ACGCGCCAGC CCCGCCGGGA CCGGCCGGAT ATGGTCCCGC CCCATCCGAC
TACCCGCCGG CCGAGCCCTT CGGCGGAGCC GGTTCGGCAC CCCCGAGTTC CGGTCCGCCG
GCCGAGCAGC CGACGGTTGC CCTGCCGATG ACTGCCGCGC CGATGTCGGG TCCGCCGACC
GCCGGTGTGC CGACGCCTGG TCCGCCGACG GCTGGTCCGC CGATGTTCGG GGTGCCCTAT
GGTGCGGGTC CGGCCCGCGC CCGGCCGGGA CGGACCGTGC TGATCCTGGC CGTGGTGGCG
GGACTGCTGT TCATCACCGG CGCGGTGATG ACCGGTCTGT TCCTGAATAC CGCCGGCGAC
CTGAACCGGG CGGAGAAGCA GCTCAGCCAG CGGGACGCGA CCATCGCGGC GAACACCGAG
GAACTGGATG AGGTCAAGGT CGACCTGCTG CGGACGCAGG ACGCGCTGGC CAACGCCCAG
CAGGACCTCA CCGGCACCCA GAACGACCGG GACGAGCAGG CCCGGCAGAA GGAGGTCATC
GCCACCTGCC TGGATCGGCT CACCACCGCG CTCGCCGCGG CGGCGATCGG CGACCGGAAG
GCACACGAGA AGGCCAACGA GGACCTGGAG GAGGTCTGCG CGGAGGCTGA GAACTACCTC
TGA
|
|---|
| Protein sequence | MSQPPTDPAE PSSQPAVPGS QPAVPGQPAA EDAGYDRYAQ GAAVPPAQGG AVPPPQDEPG
GAGPALPSPA TSSPPGPALA GDNDAPAPPG PAGYGPAPSD YPPAEPFGGA GSAPPSSGPP
AEQPTVALPM TAAPMSGPPT AGVPTPGPPT AGPPMFGVPY GAGPARARPG RTVLILAVVA
GLLFITGAVM TGLFLNTAGD LNRAEKQLSQ RDATIAANTE ELDEVKVDLL RTQDALANAQ
QDLTGTQNDR DEQARQKEVI ATCLDRLTTA LAAAAIGDRK AHEKANEDLE EVCAEAENYL
|
|---|
| |