| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1422 |
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| Symbol | |
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| ID | 5704811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1643893 |
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| End bp | 1645074 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270932 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001536313 |
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| Protein GI | 159037060 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000379462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGGACG ACACAGTGGT GGTGTGGGAC GAGGCGTTGC TGTCCTACAA CCTCGGCGAC
CACCCCCTTG ACCCGGTACG GGTCGAGCTG ACCGTCGCGC TCGCCCGGGA GCTGGGTGTG
CTCGCGCGTT CCGGGGTGCG GCTGGTCGAG CCGAAGCCCG CCGACGACGA CCTGCTGGCC
CAGGTGCACG ACCCGCGCTA CCTGGAAGCC GTGCGGAGTG CCCCGCAGGA CCCGCTCTTC
ACCGGGTTCG GGCTGGGCAC CCCGGACAAC CCGGTCTTCC CGAAGATGCA CGAGGCCAGC
GCGCTGATCG CCGGGGCCAC CGCCACGGCG GCCGAGGCAG TCTGGCGGGG CACGGCACGT
CGGGCGGTCA ACGTGGCCGG CGGTCTGCAC CACGCGATGC CCGACCGGGC CGCTGGCTTC
TGCGTCTACA ACGACCCCGC GGTCGGTATC GCCCGCCTGC TCGACCTGGG TGCACGTCGG
ATCGCGTACG TCGACGTGGA CGTCCACCAC GGCGACGGAG TGCAGCAGGT CTTCTGGGAC
GACCCGCGGG TGCTGACGGT CAGCCTGCAC GAGACGCCGC TGGCGCTCTT CCCCGGCACC
GGCTTCCCCG ACGAGACCGG CGGCGCGCAG GCCCAGGGAA GCGCGGTGAA CGTGGCGTTG
CCGCCGGGTG TCGACGACGC CGGCTGGCAG CGGGCGTTCC ACGCGATCGT GCCGTCGGTG
CTGCGTGCGT TCCAGCCGGA GATCCTGGTC ACCCAGTGCG GTGCGGACGC GCACCGGCTC
GACCCACTCG CCGACCTGCG CCTGTCGGTC GACGGGCAGC GCGCCACCTA CATCGCCCTG
CGGGCACTCG CCGACGAGCT GTGCGAGGGC CGCTGGGTCG CGACCGGCGG CGGGGGGTAC
GCGCTGGTCG AGGTGGTGCC CAGGGCGTGG ACCCACCTGC TCGCGGTGGC CACCGGCGAG
CCGCTCGAAC CGGCGACGCT GTCCCCGCCC GCCTGGCGCG AGCTGGCCCT GGCCCTCCGC
CCCGGGCAGG AGGTGCCGCT GCGGATGACC GACGACGTCA ACCCGTCGTA CGAGCCGTGG
CAGCCGTCCG GGGAGCCGAA CTCGGTGGAC CGGGCCATCG TGGCCGCCCG CAAAGCGGTG
TTCCCGCTGT TCGGGCTCGA CCCGCACGAC CCACGCGACT AG
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| Protein sequence | MPDDTVVVWD EALLSYNLGD HPLDPVRVEL TVALARELGV LARSGVRLVE PKPADDDLLA
QVHDPRYLEA VRSAPQDPLF TGFGLGTPDN PVFPKMHEAS ALIAGATATA AEAVWRGTAR
RAVNVAGGLH HAMPDRAAGF CVYNDPAVGI ARLLDLGARR IAYVDVDVHH GDGVQQVFWD
DPRVLTVSLH ETPLALFPGT GFPDETGGAQ AQGSAVNVAL PPGVDDAGWQ RAFHAIVPSV
LRAFQPEILV TQCGADAHRL DPLADLRLSV DGQRATYIAL RALADELCEG RWVATGGGGY
ALVEVVPRAW THLLAVATGE PLEPATLSPP AWRELALALR PGQEVPLRMT DDVNPSYEPW
QPSGEPNSVD RAIVAARKAV FPLFGLDPHD PRD
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