Gene Sare_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1398 
Symbol 
ID5704084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1614684 
End bp1615565 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content70% 
IMG OID641270908 
Producthypothetical protein 
Protein accessionYP_001536289 
Protein GI159037036 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00158929 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGT CATCCACGTC CGGCGACATC CCTGCGGACA AGACCGCTGT CGGCCCACCG 
AAGTGGTCAC CGCCGGGCAC CAGCCGGCAC GAGGAACCCG CCGAAGCACC ACCAGACGAC
ACCACGAAGG CGGGCACGAC GTGGTACTCA GGCGCGGAAG TCGACAACAT ACCGGACCAT
GTGGGCGACC CACCCCACCG CGGTGGCCCA CCGCAGCCGA ATGACGCCGA TCGCAGTACC
CCACGCCATC GCCGCGCGCG GCCAAGGGCT CGCCGGTCGG CCCCGACGCG GCTGCGGCGT
CAACACGTCG TTGCCGCGGG CTCTTTGGCG GTCATCCTGG CCGCACTCGC CGTTAGCGCA
GTCCAGCGCT CACCGGCGGA ATCGTCGCCT TCCGGCGCCC CCGACGCGAC CCCCGATGTG
ACCCCCAGCG CCGAATCTAC GCTGATCACG GTGTCACCCG CGCCGTCGCC GCCCCCATCC
CCGTCCCCAA CTCCGACACC AACTCCGACT CCGACTCCCA CCAAGGCAGC GGCGGCCACC
CGACCTGCGC CGTCCACGAC TCCGCCGCGG ACCTCCCCGG CGCCGGCATC GCCGACGCCA
AGTGGGCTGC CGGCACTTCC CACCTCCAGC CAGGCGTGCC AGAAGTCGGT GAGCGGCGGC
GCCGCGACGG CCCTGATATT TCGCAACGAA CGGAAGGCGA CGGTCCGGGT GTACTGGGTC
GACCACAACG GGGAACTCCA GAACTATGGG GACGTCAGCC CCGGGGACTC TCGCCGTCAA
GGGACCTACC TCGGTCATCC ATGGGTGGTG ACCACCGAGG ACGGCACGGG GCTGGTCTGC
TTTCTGCCGA CGGCAGCGGA GGCTACGGCG GTGGTCCGCT AG
 
Protein sequence
MTESSTSGDI PADKTAVGPP KWSPPGTSRH EEPAEAPPDD TTKAGTTWYS GAEVDNIPDH 
VGDPPHRGGP PQPNDADRST PRHRRARPRA RRSAPTRLRR QHVVAAGSLA VILAALAVSA
VQRSPAESSP SGAPDATPDV TPSAESTLIT VSPAPSPPPS PSPTPTPTPT PTPTKAAAAT
RPAPSTTPPR TSPAPASPTP SGLPALPTSS QACQKSVSGG AATALIFRNE RKATVRVYWV
DHNGELQNYG DVSPGDSRRQ GTYLGHPWVV TTEDGTGLVC FLPTAAEATA VVR