| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1339 |
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| Symbol | |
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| ID | 5703870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1544816 |
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| End bp | 1547176 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641270850 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001536231 |
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| Protein GI | 159036978 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.133995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000450974 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAGA GTAACCTCGG CGCCCAGTCT CGTACCGCCA CGATCGACAA CGGTGCCTTC
GGCACCCGGG TGATCACCTT TTCCACCGGC CGGCTGGCCC GCCAGGCCGC CGGCTCCGTC
GTCGCCCAGC TCGGCGAGAC GGTCGTCCTC TCCGCCACCA CCGTCGGCCG GCAGCCGAAG
GAGCAGTTCG ACTTCTTCCC GCTGACCGTC GACGTCGAGG AGCGGATGTA CGCCGCGGGC
CGGATCCCCG GTTCGTTCTT CCGCCGTGAG GGGCGACCCA GCGAGGACGC GATCCTCACC
TGCCGGCTGA TCGACCGGCC ACTGCGTCCC TCGTTCGTCA AGGGCCTGCG CAACGAGGTC
CAGGTCGTCG AGACCGTACT GGCCCTCGAC CCCAGCCACC CGTACGACGT GGTGGCCATC
AACGCCGCCT CGATGTCGAC GAAGCTCTCC GGCCTGCCGT TCTCCGGCCC GATCGGGGCG
ACCCGGATGG CCCACATCGA CGGCTCGTGG GTCGCCTTCC CGACGCACGA GGAGCTGGAG
CGCGCGACCT TCGACATGGT GGTCGCCGGT CGTGCCCTGC CGGACGGCGA CGTCGCGATC
ATGATGGTCG AGGCCGAGGC CACCGAGCAC ACCGTGAAGC TGGTCGCCGG TGGCGCGTCC
GCACCGACCG AGGAGGTCGT GGCGAGCGGG CTGGAGGCGG CCAAGCCAGC CATCCGCGAG
CTGTGCCGGG CGCAGAGCGA GCTGGCCGAG GTGGCCGCCA AGCCGGTCGC CGAGTTCCCG
GTCTTCCTCG ACTACTCCGA CGACGCGTAC CAGGCGGTCG CGGACCTGGC CCGCAGCGAC
GTGGCCGAGG CCCTGAAGAT CGCTGGGAAG GCCGACCGTG AGGAGGCCCT GGACCGGATC
AAGGCCCGGG TGATCGAGGA CCTGGGCCCG CGTTTCGAGG GCCGGGAGAA GGAGCTGTCC
GCCGCGCTGC GGTCGTTGAC CAAGTCCGAG GTCCGCAGCC GGGTGCTGCG TGAGCAGGTC
CGCATCGACG GCCGTGGCCC GCGGGACATC CGTCCGTTGA CCGCCGAGGT CGGGGTGCTG
CCCCGGGTGC ACGGCTCCGC GCTCTTCGAG CGGGGTGAGA CCCAGATCCT GGGTGTCACC
ACGTTGAACA TGCTCCGGAT GGAGCAGTCC CTGGACACGC TCTCCCCGGA GAAGTCCAAG
CGCTACATGC ACAACTACAA CTTCCCGCCG TACTCGACCG GGGAGACCGG CCGGGTCGGC
TCACCGAAGC GGCGCGAGAT CGGCCACGGC GCGCTCGCCG AGCGGGCCCT GATCCCGGTG
CTGCCCTCGC GCGAGGAGTT CCCGTACGCC ATCCGGCAGG TCTCCGAGGC GCTCGGCTCC
AACGGCTCGA CCTCGATGGG CTCGGTCTGC GCCTCCACAC TCGGCCTGCT CTCCGCCGGT
GTGCCCCTGA AGGCGCCGGT CGCCGGCATC GCCATGGGCC TGATCTCCGA CGAGGTCGAG
GGCAAGACGC GGTACGTGAC GCTGACCGAC ATCCTCGGCG CCGAGGACGC CTTCGGTGAC
ATGGACTTCA AGGTCGCCGG TACGCAGGAG TTCGTCACCG CACTTCAGCT CGACACCAAG
CTCGACGGCA TCCCGTCGGA TGTGCTGGCG GCGGCGCTGC AGCAGGCGTA CGAGGCCCGG
CAGACGATTC TGGAGGTGAT GCAGGCGGCG ATCGAGGCAC CAGCCACGAT GAGTGACTAC
GCGCCTCGGG TCACCACCGT CAAGATTCCG GTGGACAAGA TCGGCATGGT GATCGGCCCG
AAGGGCCAGA CCATCAACGC CATCCAGGAC GAGACGGGCG CCGAGATCTC GATCGAGGAC
GACGGCACCA TCTACGTCGG TGCGACCAAC GGCCCCTCCG CGCAGGCGGC GGTCGAGCGG
GTCAACGCGA TCGCGAACCC GACCCTGCCG AAGGTGGGCG ACCGCTTCCT CGGCACGGTG
GTCAAGACCG CCGCGTTCGG TGCCTTCGTC TCGCTGCTTC CTGGCCGCGA CGGCCTGCTG
CACATCTCCA AGGTGGGCGA TGGCAAGCGC GTCGAGAAGG TCGAGGACTA CCTCAACGTC
GGTGACAAGG TCGAGGTGGA GATCGCCGAC ATCGACCAGC GGGGCAAGAT CTACCTGGAC
AAGGTGCGCC CGGAGGGTGC CGAGGGCCCA GCGGAGGCCG CCGCCACCGA CCGGCCGGCC
GGCCGGGACC GGGGCGACCG GGCTCCACGT GACCGCGGTG ACCGCGGTGA CCGCGAGCGC
GGCAGCCGGG GGCCGGACCG TGGCGACGGC GGTGAGGGCG GCGGCGAGTC GCGTCCGCGT
CGCCGTACCC GGCACAGCTG A
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| Protein sequence | MTESNLGAQS RTATIDNGAF GTRVITFSTG RLARQAAGSV VAQLGETVVL SATTVGRQPK
EQFDFFPLTV DVEERMYAAG RIPGSFFRRE GRPSEDAILT CRLIDRPLRP SFVKGLRNEV
QVVETVLALD PSHPYDVVAI NAASMSTKLS GLPFSGPIGA TRMAHIDGSW VAFPTHEELE
RATFDMVVAG RALPDGDVAI MMVEAEATEH TVKLVAGGAS APTEEVVASG LEAAKPAIRE
LCRAQSELAE VAAKPVAEFP VFLDYSDDAY QAVADLARSD VAEALKIAGK ADREEALDRI
KARVIEDLGP RFEGREKELS AALRSLTKSE VRSRVLREQV RIDGRGPRDI RPLTAEVGVL
PRVHGSALFE RGETQILGVT TLNMLRMEQS LDTLSPEKSK RYMHNYNFPP YSTGETGRVG
SPKRREIGHG ALAERALIPV LPSREEFPYA IRQVSEALGS NGSTSMGSVC ASTLGLLSAG
VPLKAPVAGI AMGLISDEVE GKTRYVTLTD ILGAEDAFGD MDFKVAGTQE FVTALQLDTK
LDGIPSDVLA AALQQAYEAR QTILEVMQAA IEAPATMSDY APRVTTVKIP VDKIGMVIGP
KGQTINAIQD ETGAEISIED DGTIYVGATN GPSAQAAVER VNAIANPTLP KVGDRFLGTV
VKTAAFGAFV SLLPGRDGLL HISKVGDGKR VEKVEDYLNV GDKVEVEIAD IDQRGKIYLD
KVRPEGAEGP AEAAATDRPA GRDRGDRAPR DRGDRGDRER GSRGPDRGDG GEGGGESRPR
RRTRHS
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