| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1318 |
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| Symbol | |
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| ID | 5708396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1526006 |
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| End bp | 1528168 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270829 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001536210 |
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| Protein GI | 159036957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.939542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.14823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCG TCCTGGAGTC GGGGGGGCGT GATAGCAGCC AGGCCGGCGC CCAGGGGTAC
GCGGCCGACT GGGCTCGCGC CGTACGCCGA CTCGGTTTTG TTCCACTCAG CGCCGGGGAG
ACCCAGCGGC TGTTGCATCT GCACACCGTT GCGCTGGCAG AGGCCCTGCG CGCCGAACCT
TTCTCGTCCC GCCCGGGTGC CGAGGTCGGC CGGGCGCTGG CCGAGGCGCA CCTGACCGAG
CCGGATGTCC TCGACTGGTC GGTACGGGCA CTCGGGGATC GGTTCCTCGC CCGGGTGCTG
CCCGATCTGG TCGGTTCGGA CGAGGCGGTT GCTCGGGTCA CGGCGTTGCA GGGCGCGCTG
GCGGCCGGTT TCGCTGGCGC GTTGCGGGAC CGCACCTTCG CCCAGCAGGA GCGGATCGCG
CGTTCGGCCT GGCAGGCGCG GGACGAGGTG GAGCAGGCGC TGCGGGACAG CGAGGCCCGG
TTCCGCGCGG TCTTCTCCGG TGCCGCCATC GGTATCGGCA TCGGCCTCGT GGACGGTCAG
ATCATCGATG TCAACCAGGC ATTCGCCGAC ATGCTCGGCT ACTCGATCGA GGAGCTGCGG
CAGATCAACG TGGCGTCGTT GTTTCACCCC GACGACGCGG CCGGAATGTG GGAGCTGTAC
CAGGAACTCG TCGAGGGTAA GCACGAATCC GCCCGGCTTG AGAAGCGGTA CTACCGCAAG
GACGGTAGTG CCGTCTGGAC CGATCTCGCG GTGTCACTGG TCCGGCACGA CGACGGCCGT
CCTCGATTCA CGGTCGCGGT GGTCGAGGAC ATCACCGAGC GGTACGAACT CCAGCAACGC
CTCCGTTTCG AGGCGCTGCA CGACCCACTC ACCGGCCTAC CCAACCGGAC CCTCTTCTTC
GAAACGCTCG GTGTGATCTT CGACAACGCC GATGCCGGGC GCCGGATCGG TGTCTGCTTT
TTGGACCTGG ACGGCTTCAA GGCGGTCAAC GACAGTCTCG GTCACGACCT GGGTGACCAA
CTGCTCGTGG TGATCGCCGA CCGGTTGGCG GACTGTGTCG CCGGGTTCGG GCACCTGGTG
GCCAGGATGG GCGGCGACGA GTTCGTCATC CTGGTGGACG AGGGCGAGTC CCTCGACGAT
GTGGTGGGTG TCGCGGACGC CGCCCTCGCG GCCGTCTCCG CACCGATTCG GATCGGCGAC
CACCAACTGG TGGTGTCGGC GAGTATCGGC ATCGTCGAGT GCCCGGCGGA CACGATTGAT
CCGTCGGAGC TGATGAAAGC AGCCGACACC ACGCTGTACT GGGCCAAGGC CGAGGGGCGC
GGCCGGTGGG CGGTCTGGGA CCGGGAGCGT AGCGCGCAGG AGATCGCCCG GTCCGCGCTG
GCCGCCGGGC TGCCGGCGGC CCTGGAGCGG GGCGAGTTTG TGCTGCACTA TCAGCCGATC
GTGTCGCTGC GGGACGGCTC GATGGTGGCC GTCGAGGCGC TTGTCCGCTG GCAGCACCCC
GAGCTGGGCC TGCTCAGCCC GGTTCGGTTC ATCGGGTTGG CCGAGGAGAC CGGGCTGATC
GTCCAACTCG GTGCCTGGGT GCTGCGTCAG GCGTGTCGGG ACGCCGGCGC CTGGCGGCGC
GAGTTCCCGG ACACCCGCCT GGTCGTCAGC GTCAACCTCG CCGCGCGGCA GGTGGACGAT
CCGATCATTG TGGATACGGT GGCGGACACG CTCGCCGACA GTGGGCTTCC CGCTGACCTT
CTGCAACTGG AGCTGACCGA GAGCGCCGTG ATGGGCACCG CGGGGGAGCC ACTGCGGTCG
CTGCACCGGC TCGCCGGGCT GGGCGTCCGG CTGGCGATCG ACGACTTCGG CACTGGCTAC
TCGAACCTGG CGTACCTGCG TCGGTTGCCG ATCCGGTGCC TCAAGTTGGC TGGTCCGTTC
GTGGAAGGGC TCCGCGAGGG CACACCGGAG ATGACGACCT GCCACCGGGA CGAGCAGATC
GTGGACGCCC TGGTGCGGTT GGCGCGGGCA CTTGAGCTGT CGGTCACCGC GGAGGCGGTG
GAGACCGGGG TGCAGGCCGA GCGGCTGCGG GCGCTGCGGT GCGACACCGG GCAGGGATAC
TGGTTCGGGG TGCCGGGGCC GGTGGGTGAG ATCACGGCCC GGCTTCGCCG CCAGCACACG
TGA
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| Protein sequence | MAVVLESGGR DSSQAGAQGY AADWARAVRR LGFVPLSAGE TQRLLHLHTV ALAEALRAEP
FSSRPGAEVG RALAEAHLTE PDVLDWSVRA LGDRFLARVL PDLVGSDEAV ARVTALQGAL
AAGFAGALRD RTFAQQERIA RSAWQARDEV EQALRDSEAR FRAVFSGAAI GIGIGLVDGQ
IIDVNQAFAD MLGYSIEELR QINVASLFHP DDAAGMWELY QELVEGKHES ARLEKRYYRK
DGSAVWTDLA VSLVRHDDGR PRFTVAVVED ITERYELQQR LRFEALHDPL TGLPNRTLFF
ETLGVIFDNA DAGRRIGVCF LDLDGFKAVN DSLGHDLGDQ LLVVIADRLA DCVAGFGHLV
ARMGGDEFVI LVDEGESLDD VVGVADAALA AVSAPIRIGD HQLVVSASIG IVECPADTID
PSELMKAADT TLYWAKAEGR GRWAVWDRER SAQEIARSAL AAGLPAALER GEFVLHYQPI
VSLRDGSMVA VEALVRWQHP ELGLLSPVRF IGLAEETGLI VQLGAWVLRQ ACRDAGAWRR
EFPDTRLVVS VNLAARQVDD PIIVDTVADT LADSGLPADL LQLELTESAV MGTAGEPLRS
LHRLAGLGVR LAIDDFGTGY SNLAYLRRLP IRCLKLAGPF VEGLREGTPE MTTCHRDEQI
VDALVRLARA LELSVTAEAV ETGVQAERLR ALRCDTGQGY WFGVPGPVGE ITARLRRQHT
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