Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1293 |
Symbol | |
ID | 5706255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1504353 |
End bp | 1505801 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641270806 |
Product | hypothetical protein |
Protein accession | YP_001536187 |
Protein GI | 159036934 |
COG category | [S] Function unknown |
COG ID | [COG5361] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0149064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGGAA GAACGGGCAT GGCGCGTCGT ACGCTCCACA TTCTCGCTGT CGCCCTATCC TTGTCCGGGG TTTTGCTCAC TGCCACTATG TCGCCCGTTT CGGCGAAGTC ACCCTCCGCG AAGAATGCGG TGATCGATGA GCGGGTGGCG GAAATCTATG ATGTAACGCG TCGGTATGTG ACAAAGTTCT ACCCTCGATG GTTCACGCAC GAACAACAGC GCATCCTGTT GCCCAACATT CTTTTTGGGC CGGATCGGAT GTCCACGGTG TGGCGTGCCG TGGTGGCGCC CAATGATGAC ACGTTGTACA CATCTGCGGT CATTGGTGTG CGCCACGAGC CAGCCATTTT GGTGATACCG GAAACGACTG CTACCTACGG TGTCCTTGTC TTGGATGTCT ACGGGGACAT CATCAACACG AACATCTCGA CGGATTCTGG CGGCACGTAC GCCTTTACGG GTCCAGGCTG GCGAGGGAAA CTCCCTCCAA ACGTCATTAG GGTGCCACTT CCTGTGACGA GTGCAACCTT GATCATTCGG ACTGACAAGT TCTCCTCGGA CGGGGAGAAC CAGATCGCAA TTGCTGAGGA GTTTCGGCGG TCGCTGCGCA TGGGGCCGCT GTTGGCATAC CTGAGGGGTT CGTTGCGGGA AACCCTGATC GTCCCCGTTT TTTTCTATGG TCGTTCGTTC AAGCGTGACG CGGATACCTT GATCGCAACC AATCCGATTC GCTTTCTGGA GGAGCTTCAG CGGGCGGTCA AGAGCATCAG AACTCCACCG CTCACTGGAG AAAACAGAAT CTTGTCGGAG AGGTTCGACA GGTTGTTCAG CAGGGGAGGC TTCGAGAGGG TGTTCGCGCG AGCGACGCAG GACGCACACG CTGCGATCAT CCGTAATTAT CTTTCGAACA CCGACGAGAA CAACTGGATC AATTTCCGTA ACATCGGCTT CTGGGGGCGC AACTATCTCG ACCGGTCCTC GATCACCCAA TTCTGCCAGT ACTGCAATGA CATCGAGAAG TCGGCGTACT ACGACGTGTT CCTTGACAAA AATGGTCGAC GGCTCAATGG TGCTTCCGGC GGATACACTA TCACGTTCGA AAGGGATCAG ATTCCTCAGG CGGAACAGTT CTGGTCGGTC ACCTCGTATA TCGCGGGTAC GATAAGTCTG GTCCCCAACC CGAAGGACAA GTGGGTTGTG GCCAGTTATA CGCCAGGTCT CGAGCGAAAT AGAGATGGGT CTATTACCAT CTATGCAACA CCAACCCCTC CGCGCGGGGT GAGCAAGGCC AACTGGCTAC CCATTCCCAA GGGGGACTTC AGTATGATGC TCCGTGTCTA CGGTCCGCAG GGACGTGTCG CCGACGGCAC GTACGTCCCG CCGCCGGTGA AGAAGATTGA CCGGCGCGAC ACCGGGCGAC GGCCGTATTC GGGCGGTGGT AGCTGGTAG
|
Protein sequence | MVGRTGMARR TLHILAVALS LSGVLLTATM SPVSAKSPSA KNAVIDERVA EIYDVTRRYV TKFYPRWFTH EQQRILLPNI LFGPDRMSTV WRAVVAPNDD TLYTSAVIGV RHEPAILVIP ETTATYGVLV LDVYGDIINT NISTDSGGTY AFTGPGWRGK LPPNVIRVPL PVTSATLIIR TDKFSSDGEN QIAIAEEFRR SLRMGPLLAY LRGSLRETLI VPVFFYGRSF KRDADTLIAT NPIRFLEELQ RAVKSIRTPP LTGENRILSE RFDRLFSRGG FERVFARATQ DAHAAIIRNY LSNTDENNWI NFRNIGFWGR NYLDRSSITQ FCQYCNDIEK SAYYDVFLDK NGRRLNGASG GYTITFERDQ IPQAEQFWSV TSYIAGTISL VPNPKDKWVV ASYTPGLERN RDGSITIYAT PTPPRGVSKA NWLPIPKGDF SMMLRVYGPQ GRVADGTYVP PPVKKIDRRD TGRRPYSGGG SW
|
| |