Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1243 |
Symbol | |
ID | 5704868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1393166 |
End bp | 1394122 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270758 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001536139 |
Protein GI | 159036886 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.341345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0173551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAGTTG CCGTCCTGTC CCCGGCGCAC GAACGCGCCA GTGCCTACGC CCGGCTGTTG CACGAGATGC CCGACGTCGA GCTGCTCATC GCCGATCCGG TCGGTCCGCC GGACGGCCGT GTTCTCGGCC AGCACCTCGC CGCGCAACTC GGTGTGCCCC ATGCGAACGA CTGGGACGAG GTCCTCGAGT GGCTACCCAA CGCAGTGGTG ATCGCCAGTG AGGTCGGCCG CCACCGGGAG CTGGTCGAGC GGATGGCCGA GGCGGAGACG TTCGTACTCT GCGCCCAGCC GCTGGCTGCC ACAGAGCATG ACGTCAAGGC CATGGTGGAC GCCTGTGACA TGGCGGGTGT CCGGCTCACG GTCGAGTCCC CGGCCTGCCA CAGCGAGGCG TTCGCCGCGG TGCGCCGTGG GATAGCCGAC GGCGTTGTCG GCACGCTGAC CACCATCCAC GGCTCCTACC ATGCCCCACC GGCCGGTGCG GACGGCGCAG CGCTGGCCGG CAACGCCGCG TACCTGCTCG ACCTGGTGGA CATGGTGCTC GACGGGGATC CCGCGACCAG GGTGTACGCC CAGGCGAACA ATGTGCTCAG CGGACGGGCG GGCGCCGAGA GCGCGGCGGT GCTCACCGTC TCGTACCGCG GTGGCACCGT CGCCTCGCTC GACTGCGCCT GGAGTCGGTC GGCGCGCGGA CCGGCCCTGA CCTTCGTCGG TGACAGGGCA AGCGTGGAGT ACGACGCCAC ACCGCGGCTC CTCGACGGAT TCGACGCCGC CGCCGGCAGC GACCGGTGGG AACCGGGCGG CGAGGACCTG CATCCGCTGA TGCTCAGGGA CTTTCTCGGC ACGATCGAGA CCGGCGCGGG GGTCGGCCCG GACGGCCAGG CCGGGCTGCG CACGCAGCGG ATCATCGAGG CTGCCCACAC GTCGATGCGG ACCGGCCAGC CGGTCGACAT CGGATGA
|
Protein sequence | MRVAVLSPAH ERASAYARLL HEMPDVELLI ADPVGPPDGR VLGQHLAAQL GVPHANDWDE VLEWLPNAVV IASEVGRHRE LVERMAEAET FVLCAQPLAA TEHDVKAMVD ACDMAGVRLT VESPACHSEA FAAVRRGIAD GVVGTLTTIH GSYHAPPAGA DGAALAGNAA YLLDLVDMVL DGDPATRVYA QANNVLSGRA GAESAAVLTV SYRGGTVASL DCAWSRSARG PALTFVGDRA SVEYDATPRL LDGFDAAAGS DRWEPGGEDL HPLMLRDFLG TIETGAGVGP DGQAGLRTQR IIEAAHTSMR TGQPVDIG
|
| |